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D5DSQ6 (D5DSQ6_BACMQ) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL ADE69489.1
Gene names
Ordered Locus Names:BMQ_2467 EMBL ADE69489.1
OrganismBacillus megaterium (strain ATCC 12872 / QMB1551) [Complete proteome] [HAMAP] EMBL ADE69489.1
Taxonomic identifier545693 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length467 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
D5DSQ6 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: A89983593B08F004

FASTA46753,195
        10         20         30         40         50         60 
MPQWHPHREQ KNLPDEFPVN PLFSRQGEVT IPRLRIGDQG MLPETAYQII HDEIALDGNA 

        70         80         90        100        110        120 
RLNLATFVTT WMEPDAKRLY GESFDKNMID KDEYPQTAAI EERCVRILAD LWNSPNPDTT 

       130        140        150        160        170        180 
MGVSTTGSSE ACMLGGLALK RRWQKLRKSK GLSTDRPNIV FSSSVQVVWE KFANYWDVEP 

       190        200        210        220        230        240 
RYVNINPDHP YLDAEGVINA VDENTIGVVP ILGVTYTGVY EPIAAIAKAL DELQEKTGLD 

       250        260        270        280        290        300 
IPIHVDAASG GFIAPFLQPD LIWDFRLPRV KSINVSGHKY GLVYPGLGWV IWREKEDLPE 

       310        320        330        340        350        360 
DLIFRVSYLG GNMPTFALNF SRPGAQVLLQ YYNFLRLGKD GYYAVQKTSQ ENALFLSKEI 

       370        380        390        400        410        420 
GEMDAFEILA DGSDIPVLAW KLKEDYTPNW TLYDLSRQLR TYGWQVPAYP LPADMEEITI 

       430        440        450        460 
MRIVVRNGFS RDLAHLFMVN FKQAVEFLNS LDRPVLKDTK YDNGFHH 

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References

[1]"Genome sequences of the industrial vitamin B12-producers B. megaterium QM B1551 and DSM319 reveal new insights into the Bacillus genome evolution and pan-genome structure."
Eppinger M., Bunk B., Johns M.A., Edirisinghe J.N., Kutumbaka K.K., Riley D.R., Creasy H.H., Koenig S.S.K., Galens K., Orvis J., Creasy T., Biedendieck R., Braun C., Grayburn S., Jahn D., Ravel J., Vary P.S.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 12872 / QMB1551.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001983 Genomic DNA. Translation: ADE69489.1.
RefSeqYP_003562923.1. NC_014019.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADE69489; ADE69489; BMQ_2467.
GeneID8986905.
KEGGbmq:BMQ_2467.
PATRIC35481656. VBIBacMeg35839_2498.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000070228.
KOK01580.

Enzyme and pathway databases

BioCycBMEG545693:GHSY-2467-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD5DSQ6_BACMQ
AccessionPrimary (citable) accession number: D5DSQ6
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: October 16, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)