D5DPQ9 (D5DPQ9_BACMQ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA topoisomerase EMBL ADE68980.1

Gene names

Ordered Locus Names:

BMQ_1951 EMBL ADE68980.1

Organism

Bacillus megaterium (strain ATCC 12872 / QMB1551) [Complete proteome] [HAMAP] EMBL ADE68980.1

Taxonomic identifier

545693 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › Bacillus megaterium

Protein attributes

Sequence length	294 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the type IA topoisomerase family. RuleBase RU004206

Ontologies

Keywords
Molecular function	Isomerase EMBL ADE68980.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA topological change Inferred from electronic annotation. Source: InterPro
Cellular_component	chromosome Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA topoisomerase type I activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D5DPQ9 [UniParc]. Last modified June 15, 2010. Version 1. Checksum: AAEEE9056DC15426	FASTA	294	32,758
	10 20 30 40 50 60 MEKRAAFISK GKQQIQEGWR KVIFQNEKDD DVILPNVQEG EEGKVVKVDV KEGKTQPPKR 70 80 90 100 110 120 YTEGQLITLM KTAGKHLDND ELEKILAKSE GLGTEATRAG IITMLKDRKY IDVKKNQVFA 130 140 150 160 170 180 TDKGKVLIDA IGDKILASPE MTAKWEQRLA EIGEGAASAA AFMEQTKKLS AKIIEDAVEA 190 200 210 220 230 240 ESKWNFSGYD TESIQRKGKG KGKSFSSKSF GSCKLCDGKV VDKGSFYGCS NYAKTKCTFT 250 260 270 280 290 VSKKILDKTV TQANLKKLLS EGQTDLIEGF KKGDKTFNAK LEWKENKVQF LFEK

References

[1]

"Genome sequences of the industrial vitamin B12-producers B. megaterium QM B1551 and DSM319 reveal new insights into the Bacillus genome evolution and pan-genome structure." Eppinger M., Bunk B., Johns M.A., Edirisinghe J.N., Kutumbaka K.K., Riley D.R., Creasy H.H., Koenig S.S.K., Galens K., Orvis J., Creasy T., Biedendieck R., Braun C., Grayburn S., Jahn D., Ravel J., Vary P.S. Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 12872 / QMB1551.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001983 Genomic DNA. Translation: ADE68980.1.
RefSeq	YP_003562414.1. NC_014019.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADE68980; ADE68980; BMQ_1951.
GeneID	8986389.
KEGG	bmq:BMQ_1951.
PATRIC	35480600. VBIBacMeg35839_1974.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K03169.
Enzyme and pathway databases
BioCyc	BMEG545693:GHSY-2332-MONOMER.
Family and domain databases
Gene3D	1.10.460.10. 1 hit. 2.70.20.10. 1 hit.
InterPro	IPR000380. Topo_IA. IPR013497. Topo_IA_cen. IPR013824. Topo_IA_cen_sub1. IPR013825. Topo_IA_cen_sub2. IPR023405. Topo_IA_core_domain. IPR025589. Toprim_C_rpt. [Graphical view]
PANTHER	PTHR11390. PTHR11390. 1 hit.
Pfam	PF01131. Topoisom_bac. 1 hit. PF13342. Toprim_Crpt. 1 hit. [Graphical view]
SUPFAM	SSF56712. Topo_IA_core. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D5DPQ9_BACMQ

Accession

Primary (citable) accession number: D5DPQ9

Entry history

Integrated into UniProtKB/TrEMBL:	June 15, 2010
Last sequence update:	June 15, 2010
Last modified:	May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)