D5DNG4 (D5DNG4_BACMD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Sodium:solute symporter family protein EMBL ADF41891.1

Gene names

Ordered Locus Names:

BMD_5092

Organism

Bacillus megaterium (strain DSM 319) [Complete proteome] [HAMAP] EMBL ADF41891.1

Taxonomic identifier

592022 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › Bacillus megaterium

Protein attributes

Sequence length	570 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Membrane; Multi-pass membrane protein By similarity RuleBase RU003736.
Sequence similarities	Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. [View classification] RuleBase RU003736

Ontologies

Keywords
Biological process	Transport RuleBase RU003736
Cellular component	Membrane
Domain	Transmembrane RuleBase RU003736
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	transmembrane transport Inferred from electronic annotation. Source: InterPro
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D5DNG4 [UniParc]. Last modified June 15, 2010. Version 1. Checksum: 9016B738F336FA77	FASTA	570	62,493
	10 20 30 40 50 60 MQNAKKPFRS DTQQARPEKS NETSDFSGKS NRNNRLLTPL WTTIIGFSIF MVVAFIYSLY 70 80 90 100 110 120 NPDLYWPGLI LMFIMYGVIY FIGARAAASK KGKSDDMLVA GRSMPLWISM FTMTATWVGG 130 140 150 160 170 180 GYIAGTAETV YSSGLTWTQA PWCYSISLIL GGIFFARKMR RFEFMTMLDP LESRFGKKMA 190 200 210 220 230 240 TVLYFPAILG ELFWSAAILT ALGTTFGVIL GLSFSISIIL SALIAIAYTV IGGLWAVAHT 250 260 270 280 290 300 DILQLSIMFL GLFLVLPFAF SNTGGVGAVF STYSEGMTGS LHLFPPIKGW EDPKWGNTYW 310 320 330 340 350 360 QWWDSTFLLI FGGIPWQIYF QRVLSAKNEK AAMWLSITAG IFCALAALPP TLIGMIGYSA 370 380 390 400 410 420 DWSSFGASSP ESASMILTYV FKYLTPDLVG AIALGGLAAA VMAAVAASLL SASGMAAWNV 430 440 450 460 470 480 YRPIVKPNAT QAQLDKVIKR SIIIIGTGAT LIALNSESVY SLWYLSGDLV YCILFPQLVC 490 500 510 520 530 540 ALFFKGANWY GSLAGFIVSL VLRIGGGEPL LHLKALLPYP MIEDGVVMFP FRTFAMVGGL 550 560 570 LTIFIVSYAT RRICSPQPLQ NLHRDISVEK

References

[1]

"Genome sequences of the industrial vitamin B12-producers B. megaterium QM B1551 and DSM319 reveal new insights into the Bacillus genome evolution and pan-genome structure." Eppinger M., Bunk B., Johns M.A., Edirisinghe J.N., Kutumbaka K.K., Riley D.R., Creasy H.H., Koenig S.S.K., Galens K., Orvis J., Creasy T., Biedendieck R., Braun C., Grayburn S., Jahn D., Ravel J., Vary P.S. Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 319.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001982 Genomic DNA. Translation: ADF41891.1.
RefSeq	YP_003600241.1. NC_014103.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADF41891; ADF41891; BMD_5092.
GeneID	9120483.
KEGG	bmd:BMD_5092.
PATRIC	37260371. VBIBacMeg104484_5069.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000016386.
KO	K14387.
Enzyme and pathway databases
BioCyc	BMEG592022:GIVX-5092-MONOMER.
Family and domain databases
InterPro	IPR001734. Na/solute_symporter. [Graphical view]
PANTHER	PTHR11819. PTHR11819. 1 hit.
Pfam	PF00474. SSF. 1 hit. [Graphical view]
PROSITE	PS50283. NA_SOLUT_SYMP_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D5DNG4_BACMD

Accession

Primary (citable) accession number: D5DNG4

Entry history

Integrated into UniProtKB/TrEMBL:	June 15, 2010
Last sequence update:	June 15, 2010
Last modified:	May 1, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)