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D5DME4

- D5DME4_BACMD

UniProt

D5DME4 - D5DME4_BACMD

Protein
Submitted name:

Alpha-amylase

Gene

amyL

Organism
Bacillus megaterium (strain DSM 319)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 25 (01 Oct 2014)
      Sequence version 1 (15 Jun 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseImported, Hydrolase

    Enzyme and pathway databases

    BioCyciBMEG592022:GIVX-5229-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-amylaseImported (EC:3.2.1.1Imported)
    Gene namesi
    Name:amyLImported
    Ordered Locus Names:BMD_5229Imported
    OrganismiBacillus megaterium (strain DSM 319)Imported
    Taxonomic identifieri592022 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000002365: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD5DME4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000094847.
    KOiK01176.
    OMAiFNGTDYD.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR013776. A-amylase_thermo.
    IPR015237. Alpha-amylase_C_pro.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF09154. DUF1939. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D5DME4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MERNHTIMQF FEWHVPADGE HWQRLKELAP QLKEQGIDSV WIPPVTKGVS    50
    SEDNGYGVYD LYDLGEFDQK GTVRTKYGTK QELHEAIDAC HNHGINVYVD 100
    IVMNHKAAAD EKETFHVIEV DPMNRTEEIS EPFEIEGWTK FTFEGRGDQY 150
    SSFKWNFNHF NGTDYDDKNG KEGVFRIAGE NKSWNENVDQ EFGNYDYLMF 200
    ANIDYNHPEV REEMIKWGKW LADTLQCDGY RLDAIKHINH DFIKEFAHEL 250
    SSSQEKPFYF VGEFWNPELT ACQEFLDVID YQIDLFDVSL HYKLHEASQQ 300
    GRDFDLTTIF DDTLVKTHPL NVVTFVDNHD SQPNESLESW VEDWFKQSAY 350
    ALILLREDGY PCVFYGDYFG IGGEHPIKGK EKDISALLHV RYDKAYGQQD 400
    DYFDHPNTIG WVRHGVEEFE KSGCAVVISN GEDGEKRMFV GEHRSGQTWI 450
    DFTNNREDQV VIEEDGYGQF PVNGGSVSVW AEA 483
    Length:483
    Mass (Da):56,090
    Last modified:June 15, 2010 - v1
    Checksum:i872863FBA4031B1E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001982 Genomic DNA. Translation: ADF42028.1.
    RefSeqiYP_003600378.1. NC_014103.1.

    Genome annotation databases

    EnsemblBacteriaiADF42028; ADF42028; BMD_5229.
    GeneIDi9120620.
    KEGGibmd:BMD_5229.
    PATRICi37260651. VBIBacMeg104484_5209.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001982 Genomic DNA. Translation: ADF42028.1 .
    RefSeqi YP_003600378.1. NC_014103.1.

    3D structure databases

    ProteinModelPortali D5DME4.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADF42028 ; ADF42028 ; BMD_5229 .
    GeneIDi 9120620.
    KEGGi bmd:BMD_5229.
    PATRICi 37260651. VBIBacMeg104484_5209.

    Phylogenomic databases

    HOGENOMi HOG000094847.
    KOi K01176.
    OMAi FNGTDYD.

    Enzyme and pathway databases

    BioCyci BMEG592022:GIVX-5229-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR013776. A-amylase_thermo.
    IPR015237. Alpha-amylase_C_pro.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF09154. DUF1939. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequences of the industrial vitamin B12-producers B. megaterium QM B1551 and DSM319 reveal new insights into the Bacillus genome evolution and pan-genome structure."
      Eppinger M., Bunk B., Johns M.A., Edirisinghe J.N., Kutumbaka K.K., Riley D.R., Creasy H.H., Koenig S.S.K., Galens K., Orvis J., Creasy T., Biedendieck R., Braun C., Grayburn S., Jahn D., Ravel J., Vary P.S.
      Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 319Imported.

    Entry informationi

    Entry nameiD5DME4_BACMD
    AccessioniPrimary (citable) accession number: D5DME4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 15, 2010
    Last sequence update: June 15, 2010
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3