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D5DKP7

- D5DKP7_BACMD

UniProt

D5DKP7 - D5DKP7_BACMD

Protein
Submitted name:

4-aminobutyrate transaminase

Gene

gabT

Organism
Bacillus megaterium (strain DSM 319)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 25 (01 Oct 2014)
      Sequence version 1 (15 Jun 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. gamma-aminobutyric acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    AminotransferaseImported, Transferase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciBMEG592022:GIVX-4063-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    4-aminobutyrate transaminaseImported (EC:2.6.1.19Imported)
    Gene namesi
    Name:gabTImported
    Ordered Locus Names:BMD_4063Imported
    OrganismiBacillus megaterium (strain DSM 319)Imported
    Taxonomic identifieri592022 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000002365: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD5DKP7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000020206.
    KOiK07250.
    OMAiKVTHACF.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR004632. 4NH2But_aminotransferase_bac.
    IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PANTHERiPTHR11986. PTHR11986. 1 hit.
    PfamiPF00202. Aminotran_3. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
    PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D5DKP7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSQTFSKVAT NLPGENAKQL LDRRHRAIPK GVSYGIPTFA DTAEGAIVKD    50
    VDGNTFIDFV GAIGTINVGH SHPKVKEALH KQVDRFIHTG FNVMMYESYV 100
    ELAERLAAIA PGEFDKKVLL LNSGAEAVEN AVKIARKYTK RQGIISFNRG 150
    FHGRTLMTMT MTSKVKPYKY EFGPFAPEVY KAPYPYEYRR PQGLSVEAYE 200
    DFMITEFKNF LNTEVAPETI AAVVMEPIQG EGGFIVPGKR FVQEVYQLCK 250
    EHGILFVSDE IQAGFARTGR YFGIEHFDVE PDLITVSKSL GAGVPISGVI 300
    GRAEIMDESN PGELGGTYCG SPLGCEAALA VLDIIEEEKL NERGEYLGKV 350
    VTSRFEKLAE RYDCIGDIRG LGAMSAIELV KDRETKEADK ELTQRIVKEA 400
    NKRGLLLLSA GVFGNVLRIL MPIVITDEQL EEGLAIFEAA LEASVQQTVE 450
    V 451
    Length:451
    Mass (Da):49,764
    Last modified:June 15, 2010 - v1
    Checksum:i292F918AFE51B5D9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001982 Genomic DNA. Translation: ADF40893.1.
    RefSeqiWP_013084714.1. NC_014103.1.
    YP_003599243.1. NC_014103.1.

    Genome annotation databases

    EnsemblBacteriaiADF40893; ADF40893; BMD_4063.
    GeneIDi9119454.
    KEGGibmd:BMD_4063.
    PATRICi37258289. VBIBacMeg104484_4058.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001982 Genomic DNA. Translation: ADF40893.1 .
    RefSeqi WP_013084714.1. NC_014103.1.
    YP_003599243.1. NC_014103.1.

    3D structure databases

    ProteinModelPortali D5DKP7.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADF40893 ; ADF40893 ; BMD_4063 .
    GeneIDi 9119454.
    KEGGi bmd:BMD_4063.
    PATRICi 37258289. VBIBacMeg104484_4058.

    Phylogenomic databases

    HOGENOMi HOG000020206.
    KOi K07250.
    OMAi KVTHACF.

    Enzyme and pathway databases

    BioCyci BMEG592022:GIVX-4063-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR004632. 4NH2But_aminotransferase_bac.
    IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    PANTHERi PTHR11986. PTHR11986. 1 hit.
    Pfami PF00202. Aminotran_3. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR00700. GABAtrnsam. 1 hit.
    PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequences of the industrial vitamin B12-producers B. megaterium QM B1551 and DSM319 reveal new insights into the Bacillus genome evolution and pan-genome structure."
      Eppinger M., Bunk B., Johns M.A., Edirisinghe J.N., Kutumbaka K.K., Riley D.R., Creasy H.H., Koenig S.S.K., Galens K., Orvis J., Creasy T., Biedendieck R., Braun C., Grayburn S., Jahn D., Ravel J., Vary P.S.
      Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 319Imported.

    Entry informationi

    Entry nameiD5DKP7_BACMD
    AccessioniPrimary (citable) accession number: D5DKP7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 15, 2010
    Last sequence update: June 15, 2010
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3