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D5DKP7

- D5DKP7_BACMD

UniProt

D5DKP7 - D5DKP7_BACMD

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Protein
Submitted name:

4-aminobutyrate transaminase

Gene

gabT

Organism
Bacillus megaterium (strain DSM 319)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. gamma-aminobutyric acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciBMEG592022:GIVX-4063-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate transaminaseImported (EC:2.6.1.19Imported)
Gene namesi
Name:gabTImported
Ordered Locus Names:BMD_4063Imported
OrganismiBacillus megaterium (strain DSM 319)Imported
Taxonomic identifieri592022 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000002365: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD5DKP7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000020206.
KOiK07250.
OMAiKVTHACF.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5DKP7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSQTFSKVAT NLPGENAKQL LDRRHRAIPK GVSYGIPTFA DTAEGAIVKD
60 70 80 90 100
VDGNTFIDFV GAIGTINVGH SHPKVKEALH KQVDRFIHTG FNVMMYESYV
110 120 130 140 150
ELAERLAAIA PGEFDKKVLL LNSGAEAVEN AVKIARKYTK RQGIISFNRG
160 170 180 190 200
FHGRTLMTMT MTSKVKPYKY EFGPFAPEVY KAPYPYEYRR PQGLSVEAYE
210 220 230 240 250
DFMITEFKNF LNTEVAPETI AAVVMEPIQG EGGFIVPGKR FVQEVYQLCK
260 270 280 290 300
EHGILFVSDE IQAGFARTGR YFGIEHFDVE PDLITVSKSL GAGVPISGVI
310 320 330 340 350
GRAEIMDESN PGELGGTYCG SPLGCEAALA VLDIIEEEKL NERGEYLGKV
360 370 380 390 400
VTSRFEKLAE RYDCIGDIRG LGAMSAIELV KDRETKEADK ELTQRIVKEA
410 420 430 440 450
NKRGLLLLSA GVFGNVLRIL MPIVITDEQL EEGLAIFEAA LEASVQQTVE

V
Length:451
Mass (Da):49,764
Last modified:June 15, 2010 - v1
Checksum:i292F918AFE51B5D9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001982 Genomic DNA. Translation: ADF40893.1.
RefSeqiYP_003599243.1. NC_014103.1.

Genome annotation databases

EnsemblBacteriaiADF40893; ADF40893; BMD_4063.
GeneIDi9119454.
KEGGibmd:BMD_4063.
PATRICi37258289. VBIBacMeg104484_4058.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001982 Genomic DNA. Translation: ADF40893.1 .
RefSeqi YP_003599243.1. NC_014103.1.

3D structure databases

ProteinModelPortali D5DKP7.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADF40893 ; ADF40893 ; BMD_4063 .
GeneIDi 9119454.
KEGGi bmd:BMD_4063.
PATRICi 37258289. VBIBacMeg104484_4058.

Phylogenomic databases

HOGENOMi HOG000020206.
KOi K07250.
OMAi KVTHACF.

Enzyme and pathway databases

BioCyci BMEG592022:GIVX-4063-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
PANTHERi PTHR11986. PTHR11986. 1 hit.
Pfami PF00202. Aminotran_3. 1 hit.
[Graphical view ]
PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR00700. GABAtrnsam. 1 hit.
PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequences of the industrial vitamin B12-producers B. megaterium QM B1551 and DSM319 reveal new insights into the Bacillus genome evolution and pan-genome structure."
    Eppinger M., Bunk B., Johns M.A., Edirisinghe J.N., Kutumbaka K.K., Riley D.R., Creasy H.H., Koenig S.S.K., Galens K., Orvis J., Creasy T., Biedendieck R., Braun C., Grayburn S., Jahn D., Ravel J., Vary P.S.
    Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 319Imported.

Entry informationi

Entry nameiD5DKP7_BACMD
AccessioniPrimary (citable) accession number: D5DKP7
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: October 29, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3