D5DKP7 (D5DKP7_BACMD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-aminobutyrate transaminase EMBL ADF40893.1
EC=2.6.1.19 EMBL ADF40893.1

Gene names

Name:	gabT EMBL ADF40893.1
Ordered Locus Names:	BMD_4063

Organism

Bacillus megaterium (strain DSM 319) [Complete proteome] [HAMAP] EMBL ADF40893.1

Taxonomic identifier

592022 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › Bacillus megaterium

Protein attributes

Sequence length	451 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL ADF40893.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	gamma-aminobutyric acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D5DKP7 [UniParc]. Last modified June 15, 2010. Version 1. Checksum: 292F918AFE51B5D9	FASTA	451	49,764
	10 20 30 40 50 60 MSQTFSKVAT NLPGENAKQL LDRRHRAIPK GVSYGIPTFA DTAEGAIVKD VDGNTFIDFV 70 80 90 100 110 120 GAIGTINVGH SHPKVKEALH KQVDRFIHTG FNVMMYESYV ELAERLAAIA PGEFDKKVLL 130 140 150 160 170 180 LNSGAEAVEN AVKIARKYTK RQGIISFNRG FHGRTLMTMT MTSKVKPYKY EFGPFAPEVY 190 200 210 220 230 240 KAPYPYEYRR PQGLSVEAYE DFMITEFKNF LNTEVAPETI AAVVMEPIQG EGGFIVPGKR 250 260 270 280 290 300 FVQEVYQLCK EHGILFVSDE IQAGFARTGR YFGIEHFDVE PDLITVSKSL GAGVPISGVI 310 320 330 340 350 360 GRAEIMDESN PGELGGTYCG SPLGCEAALA VLDIIEEEKL NERGEYLGKV VTSRFEKLAE 370 380 390 400 410 420 RYDCIGDIRG LGAMSAIELV KDRETKEADK ELTQRIVKEA NKRGLLLLSA GVFGNVLRIL 430 440 450 MPIVITDEQL EEGLAIFEAA LEASVQQTVE V

References

[1]

"Genome sequences of the industrial vitamin B12-producers B. megaterium QM B1551 and DSM319 reveal new insights into the Bacillus genome evolution and pan-genome structure." Eppinger M., Bunk B., Johns M.A., Edirisinghe J.N., Kutumbaka K.K., Riley D.R., Creasy H.H., Koenig S.S.K., Galens K., Orvis J., Creasy T., Biedendieck R., Braun C., Grayburn S., Jahn D., Ravel J., Vary P.S. Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 319.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001982 Genomic DNA. Translation: ADF40893.1.
RefSeq	YP_003599243.1. NC_014103.1.
3D structure databases
ProteinModelPortal	D5DKP7.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADF40893; ADF40893; BMD_4063.
GeneID	9119454.
KEGG	bmd:BMD_4063.
PATRIC	37258289. VBIBacMeg104484_4058.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000020206.
KO	K07250.
Enzyme and pathway databases
BioCyc	BMEG592022:GIVX-4063-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR004632. 4NH2But_aminotransferase_bac. IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR00700. GABAtrnsam. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D5DKP7_BACMD

Accession

Primary (citable) accession number: D5DKP7

Entry history

Integrated into UniProtKB/TrEMBL:	June 15, 2010
Last sequence update:	June 15, 2010
Last modified:	May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)