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D5DKP7 (D5DKP7_BACMD) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.6.1.19 EMBL ADF40893.1
Gene names
Name:gabT EMBL ADF40893.1
Ordered Locus Names:BMD_4063 EMBL ADF40893.1
OrganismBacillus megaterium (strain DSM 319) [Complete proteome] [HAMAP] EMBL ADF40893.1
Taxonomic identifier592022 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length451 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
D5DKP7 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: 292F918AFE51B5D9

FASTA45149,764
        10         20         30         40         50         60 
MSQTFSKVAT NLPGENAKQL LDRRHRAIPK GVSYGIPTFA DTAEGAIVKD VDGNTFIDFV 

        70         80         90        100        110        120 
GAIGTINVGH SHPKVKEALH KQVDRFIHTG FNVMMYESYV ELAERLAAIA PGEFDKKVLL 

       130        140        150        160        170        180 
LNSGAEAVEN AVKIARKYTK RQGIISFNRG FHGRTLMTMT MTSKVKPYKY EFGPFAPEVY 

       190        200        210        220        230        240 
KAPYPYEYRR PQGLSVEAYE DFMITEFKNF LNTEVAPETI AAVVMEPIQG EGGFIVPGKR 

       250        260        270        280        290        300 
FVQEVYQLCK EHGILFVSDE IQAGFARTGR YFGIEHFDVE PDLITVSKSL GAGVPISGVI 

       310        320        330        340        350        360 
GRAEIMDESN PGELGGTYCG SPLGCEAALA VLDIIEEEKL NERGEYLGKV VTSRFEKLAE 

       370        380        390        400        410        420 
RYDCIGDIRG LGAMSAIELV KDRETKEADK ELTQRIVKEA NKRGLLLLSA GVFGNVLRIL 

       430        440        450 
MPIVITDEQL EEGLAIFEAA LEASVQQTVE V 

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References

[1]"Genome sequences of the industrial vitamin B12-producers B. megaterium QM B1551 and DSM319 reveal new insights into the Bacillus genome evolution and pan-genome structure."
Eppinger M., Bunk B., Johns M.A., Edirisinghe J.N., Kutumbaka K.K., Riley D.R., Creasy H.H., Koenig S.S.K., Galens K., Orvis J., Creasy T., Biedendieck R., Braun C., Grayburn S., Jahn D., Ravel J., Vary P.S.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 319.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001982 Genomic DNA. Translation: ADF40893.1.
RefSeqYP_003599243.1. NC_014103.1.

3D structure databases

ProteinModelPortalD5DKP7.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADF40893; ADF40893; BMD_4063.
GeneID9119454.
KEGGbmd:BMD_4063.
PATRIC37258289. VBIBacMeg104484_4058.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000020206.
KOK07250.
OMAKVTHACF.

Enzyme and pathway databases

BioCycBMEG592022:GIVX-4063-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR00700. GABAtrnsam. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5DKP7_BACMD
AccessionPrimary (citable) accession number: D5DKP7
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: May 14, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)