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D5DH72 (D5DH72_BACMD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Enoyl-[acyl-carrier-protein] reductase [NADH] PIRNR PIRNR000094
EC=1.3.1.9 PIRNR PIRNR000094
Gene names
Name:fabI EMBL ADF40193.1
Ordered Locus Names:BMD_3353
OrganismBacillus megaterium (strain DSM 319) [Complete proteome] [HAMAP] EMBL ADF40193.1
Taxonomic identifier592022 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus ›

Protein attributes

Sequence length259 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Acyl-[acyl-carrier-protein] + NAD+ = trans-2,3-dehydroacyl-[acyl-carrier-protein] + NADH. PIRNR PIRNR000094

Pathway

Lipid metabolism; fatty acid biosynthesis. PIRNR PIRNR000094

Sequence similarities

Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily. PIRNR PIRNR000094

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1501Proton acceptor By similarity PIRSR PIRSR000094-1
Active site1601Proton acceptor By similarity PIRSR PIRSR000094-1
Binding site1001Substrate; via amide nitrogen and carbonyl oxygen By similarity PIRSR PIRSR000094-2

Sequences

Sequence LengthMass (Da)Tools
D5DH72 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: A14F815FF15B7832

FASTA25927,737
        10         20         30         40         50         60 
MEDLLQLKNK NIVIMGVAND RSIAWGVAKA LHQVGANLIF TYRKERSLGK LNKLLEKNEI 

        70         80         90        100        110        120 
QASLIAECDV NSDESIEAAF KKIGEEAGTV HGVIHSVAFA HSEDLNGEFI NTSRSGYAFA 

       130        140        150        160        170        180 
QDTSAYSFIA VAKAAKPLMT EGGSLVAMSY LGAERAVEGY NVMGVAKAAL ESSVKYLALD 

       190        200        210        220        230        240 
LGKDNIRVNA ISAGPIRTLA AKGISDFNQI LHHVEEKAPL KRNVTQAEVG DMTVVLLSHL 

       250 
SRGVTGEIVH VDAGYNIVG

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References

[1]"Genome sequences of the industrial vitamin B12-producers B. megaterium QM B1551 and DSM319 reveal new insights into the Bacillus genome evolution and pan-genome structure."
Eppinger M., Bunk B., Johns M.A., Edirisinghe J.N., Kutumbaka K.K., Riley D.R., Creasy H.H., Koenig S.S.K., Galens K., Orvis J., Creasy T., Biedendieck R., Braun C., Grayburn S., Jahn D., Ravel J., Vary P.S.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 319.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001982 Genomic DNA. Translation: ADF40193.1.
RefSeqYP_003598543.1. NC_014103.1.

3D structure databases

ProteinModelPortalD5DH72.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADF40193; ADF40193; BMD_3353.
GeneID9118744.
KEGGbmd:BMD_3353.
PATRIC37256823. VBIBacMeg104484_3333.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00208.

Enzyme and pathway databases

BioCycBMEG592022:GIVX-3353-MONOMER.
UniPathwayUPA00094.

Family and domain databases

Gene3D3.40.50.720. 1 hit.
InterProIPR014358. Enoyl-ACP_Rdtase_NADH.
IPR002347. Glc/ribitol_DH.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PIRSFPIRSF000094. Enoyl-ACP_rdct. 1 hit.
PRINTSPR00081. GDHRDH.
ProtoNetSearch...

Entry information

Entry nameD5DH72_BACMD
AccessionPrimary (citable) accession number: D5DH72
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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