Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

D5DEK8

- D5DEK8_BACMD

UniProt

D5DEK8 - D5DEK8_BACMD

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Glutamate decarboxylase

Gene

BMD_2444

Organism
Bacillus megaterium (strain DSM 319)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

Note: Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciBMEG592022:GIVX-2444-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:BMD_2444Imported
OrganismiBacillus megaterium (strain DSM 319)Imported
Taxonomic identifieri592022 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000002365: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000070228.
KOiK01580.
OMAiNAPKEMS.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

D5DEK8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPQWHPHREQ KNLPDEFPVN PLFSRQGEVT IPRLRISDQG MLPETAYQII
60 70 80 90 100
HDEIALDGNA RLNLATFVTT WMEPDAKRLY GESFDKNMID KDEYPQTAAI
110 120 130 140 150
EERCVRILAD LWNSPNPDTT MGVSTTGSSE ACMLGGLALK RRWQKLRKSK
160 170 180 190 200
GLSTERPNIV FSSSVQVVWE KFANYWDVEP RYVNINADHP YLDPEGVIKA
210 220 230 240 250
VDENTIGVVP ILGVTYTGVY EPIAAIAKAL DELQEKTGLD IPIHIDAASG
260 270 280 290 300
GFIAPFLQPD LIWDFRLPRV KSINVSGHKY GLVYPGLGWV IWREKEDLPE
310 320 330 340 350
DLIFRVSYLG GNMPTFALNF SRPGAQVLLQ YYNFLRLGKD GYYAVQKTSQ
360 370 380 390 400
ENALFLSKEI GEMEAFEIIA DGSDIPVLAW KLKEGYTPNW TLYDLSRQLR
410 420 430 440 450
TYGWQVPAYP LPADMEEITI MRIVVRNGFS RDLAHLFMVN FKQAVEFLNS
460
LDRPVLKDTK YDNGFHH
Length:467
Mass (Da):53,223
Last modified:June 15, 2010 - v1
Checksum:i49F0BE982EB72805
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001982 Genomic DNA. Translation: ADF39290.1.
RefSeqiYP_003597640.1. NC_014103.1.

Genome annotation databases

EnsemblBacteriaiADF39290; ADF39290; BMD_2444.
GeneIDi9117835.
KEGGibmd:BMD_2444.
PATRICi37254951. VBIBacMeg104484_2397.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001982 Genomic DNA. Translation: ADF39290.1 .
RefSeqi YP_003597640.1. NC_014103.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADF39290 ; ADF39290 ; BMD_2444 .
GeneIDi 9117835.
KEGGi bmd:BMD_2444.
PATRICi 37254951. VBIBacMeg104484_2397.

Phylogenomic databases

HOGENOMi HOG000070228.
KOi K01580.
OMAi NAPKEMS.

Enzyme and pathway databases

BioCyci BMEG592022:GIVX-2444-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome sequences of the industrial vitamin B12-producers B. megaterium QM B1551 and DSM319 reveal new insights into the Bacillus genome evolution and pan-genome structure."
    Eppinger M., Bunk B., Johns M.A., Edirisinghe J.N., Kutumbaka K.K., Riley D.R., Creasy H.H., Koenig S.S.K., Galens K., Orvis J., Creasy T., Biedendieck R., Braun C., Grayburn S., Jahn D., Ravel J., Vary P.S.
    Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 319Imported.

Entry informationi

Entry nameiD5DEK8_BACMD
AccessioniPrimary (citable) accession number: D5DEK8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: November 26, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3