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D5DEK8

- D5DEK8_BACMD

UniProt

D5DEK8 - D5DEK8_BACMD

Protein

Glutamate decarboxylase

Gene

BMD_2444

Organism
Bacillus megaterium (strain DSM 319)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (15 Jun 2010)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: UniProtKB-EC
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciBMEG592022:GIVX-2444-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Ordered Locus Names:BMD_2444Imported
    OrganismiBacillus megaterium (strain DSM 319)Imported
    Taxonomic identifieri592022 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000002365: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000070228.
    KOiK01580.
    OMAiNAPKEMS.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D5DEK8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPQWHPHREQ KNLPDEFPVN PLFSRQGEVT IPRLRISDQG MLPETAYQII    50
    HDEIALDGNA RLNLATFVTT WMEPDAKRLY GESFDKNMID KDEYPQTAAI 100
    EERCVRILAD LWNSPNPDTT MGVSTTGSSE ACMLGGLALK RRWQKLRKSK 150
    GLSTERPNIV FSSSVQVVWE KFANYWDVEP RYVNINADHP YLDPEGVIKA 200
    VDENTIGVVP ILGVTYTGVY EPIAAIAKAL DELQEKTGLD IPIHIDAASG 250
    GFIAPFLQPD LIWDFRLPRV KSINVSGHKY GLVYPGLGWV IWREKEDLPE 300
    DLIFRVSYLG GNMPTFALNF SRPGAQVLLQ YYNFLRLGKD GYYAVQKTSQ 350
    ENALFLSKEI GEMEAFEIIA DGSDIPVLAW KLKEGYTPNW TLYDLSRQLR 400
    TYGWQVPAYP LPADMEEITI MRIVVRNGFS RDLAHLFMVN FKQAVEFLNS 450
    LDRPVLKDTK YDNGFHH 467
    Length:467
    Mass (Da):53,223
    Last modified:June 15, 2010 - v1
    Checksum:i49F0BE982EB72805
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001982 Genomic DNA. Translation: ADF39290.1.
    RefSeqiYP_003597640.1. NC_014103.1.

    Genome annotation databases

    EnsemblBacteriaiADF39290; ADF39290; BMD_2444.
    GeneIDi9117835.
    KEGGibmd:BMD_2444.
    PATRICi37254951. VBIBacMeg104484_2397.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001982 Genomic DNA. Translation: ADF39290.1 .
    RefSeqi YP_003597640.1. NC_014103.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADF39290 ; ADF39290 ; BMD_2444 .
    GeneIDi 9117835.
    KEGGi bmd:BMD_2444.
    PATRICi 37254951. VBIBacMeg104484_2397.

    Phylogenomic databases

    HOGENOMi HOG000070228.
    KOi K01580.
    OMAi NAPKEMS.

    Enzyme and pathway databases

    BioCyci BMEG592022:GIVX-2444-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequences of the industrial vitamin B12-producers B. megaterium QM B1551 and DSM319 reveal new insights into the Bacillus genome evolution and pan-genome structure."
      Eppinger M., Bunk B., Johns M.A., Edirisinghe J.N., Kutumbaka K.K., Riley D.R., Creasy H.H., Koenig S.S.K., Galens K., Orvis J., Creasy T., Biedendieck R., Braun C., Grayburn S., Jahn D., Ravel J., Vary P.S.
      Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 319Imported.

    Entry informationi

    Entry nameiD5DEK8_BACMD
    AccessioniPrimary (citable) accession number: D5DEK8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 15, 2010
    Last sequence update: June 15, 2010
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3