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D5DBF5 (D5DBF5_BACMD) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.6.1.- EMBL ADF37937.1
Gene names
Ordered Locus Names:BMD_1076 EMBL ADF37937.1
OrganismBacillus megaterium (strain DSM 319) [Complete proteome] [HAMAP] EMBL ADF37937.1
Taxonomic identifier592022 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length438 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
D5DBF5 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: 09B0D089DFE00534

FASTA43847,856
        10         20         30         40         50         60 
MTQASLTQLM NSLPDLLAPS MAKDHPNLPV VKAEGCYYYG ADGKTYLDFT SGIATANTGH 

        70         80         90        100        110        120 
RHPKVVQAIK ESVDHLMHGP SGVIMYESIL QLAEELKTVL PRGLDCFFFA NSGTEAIEGA 

       130        140        150        160        170        180 
LKLAKYVTQR PYTVSFTGCF HGRSLGALSV TTSKSKYRKF LQPSGLTYQV PYADVIQCPK 

       190        200        210        220        230        240 
GEDPEIYCVE KLEKDFDTLF KHQVTPEEVA CMIVEPVLGE GGYVIPPKAW LQKIREVCDR 

       250        260        270        280        290        300 
HGILLIFDEV QTGFGRTGEW FAAQTFNVTP DIMAIAKGIA SGLPLSATVA SKQLMEKWPI 

       310        320        330        340        350        360 
GTHGTTFGGN PIACSAALAT LDVLKEEKLI ENSKEMGKYA ADQLQHLKAK HEVIGSIRSV 

       370        380        390        400        410        420 
GLLIGIEIIN PKTKQGDGNL LLEILDKCLE KGVLFYLCGN SGEVIRMIPP LTITKEEIDA 

       430 
GLRVLDEALT EITSLHVI 

« Hide

References

[1]"Genome sequences of the industrial vitamin B12-producers B. megaterium QM B1551 and DSM319 reveal new insights into the Bacillus genome evolution and pan-genome structure."
Eppinger M., Bunk B., Johns M.A., Edirisinghe J.N., Kutumbaka K.K., Riley D.R., Creasy H.H., Koenig S.S.K., Galens K., Orvis J., Creasy T., Biedendieck R., Braun C., Grayburn S., Jahn D., Ravel J., Vary P.S.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 319.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001982 Genomic DNA. Translation: ADF37937.1.
RefSeqYP_003596287.1. NC_014103.1.

3D structure databases

ProteinModelPortalD5DBF5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADF37937; ADF37937; BMD_1076.
GeneID9116467.
KEGGbmd:BMD_1076.
PATRIC37252135. VBIBacMeg104484_0994.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000020206.
KOK00823.
OMAQNDLAMA.

Enzyme and pathway databases

BioCycBMEG592022:GIVX-1076-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5DBF5_BACMD
AccessionPrimary (citable) accession number: D5DBF5
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: May 14, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)