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D5DB23

- D5DB23_BACMD

UniProt

D5DB23 - D5DB23_BACMD

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Protein
Phosphoenolpyruvate carboxylase
Gene
ppc, BMD_0812
Organism
Bacillus megaterium (strain DSM 319)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotations

Cofactori

Magnesium By similarity.UniRule annotationSAAS annotations

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei152 – 1521 By similarityUniRule annotation
Active sitei579 – 5791 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, PyruvateImported

Enzyme and pathway databases

BioCyciBMEG592022:GIVX-812-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:BMD_0812Imported
OrganismiBacillus megaterium (strain DSM 319)Imported
Taxonomic identifieri592022 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000002365: Chromosome

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000238647.
KOiK01595.
OMAiIDIVAQK.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5DB23-1 [UniParc]FASTAAdd to Basket

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MVTVEAAERQ NSSTALRRDV KFLGQLLGKV LVHQGGEELL SKVEKIREVA    50
KSLRENKDEV IYKEIKNEIV TLEQPMREQV IRAFAVYFHL VNIAEQNHRI 100
RRRREYQQQE DSIMQPGSLE SAVVSLKNNG VAPDVIANLL QTLSLELIIT 150
AHPTEATRRS VLDIHKRMAE LLKNLDNPTL TKRERTEIEE RLFSEVLILW 200
QTNELRDRKP TVMDEVSNGL YYFDETLFEV LPQLHQELEN SLQENYPEEN 250
WKVPNILRFG SWIGGDRDGN PNVTPKVTWQ TLVKQRKLAI RKYKESLTQL 300
RQRLSQSTKR VAVSDNLLDS INQEISLLPE KKRWRIKHEV YRCKLTIMLH 350
KLNLVGESEA GYQRSEELLH DLFLIKDSLQ KHQPQDYQLK SLCKLIRQVE 400
LFGFHLATLD IRNHSGEHEA AIKEIFHAVS LAEDYSALTE EKKVELLGKV 450
LQDPRPVISF VENYSKETQQ VIEVFNMIHR AHKEFGERSI EVYLISMTQS 500
ASDLLEVMVL AKEAGIYRLH ADGRIESKLN IAPLLETIDD LTAGPKIMEQ 550
LFQLDFYREH LREQQDLQEI MLGYSDGSKD GGTLTANWKL YKAQQEIHDM 600
AKKYQVRLKF FHGRGGSLGR GGGPLNRSIL SQPVETLGDG VKITEQGEVL 650
SSRYALYDIA YRSLEQAVSA LLTAAANVSQ EAEQCDIRTH EWEETMDEIS 700
TASLRKYQEL VFKDPDFLTY FKQATPLPEL GALNIGSRPM SRKGSDRFED 750
LRAIPWVFAW TQSRQLLPAW YAAGTGLQHL VEKSGDIQLL QQMYKEWPFF 800
RSTVDNLQMA LTKADLMAAK EYTEMVQDPA ISERIFTAIK KEYNLTKEMI 850
LQITGQKELM DHLPTIKESI KLRNPYVDPL TFLQVKVISK LREDEAGTLN 900
EELLKEALLT INGIAAGLRN TG 922
Length:922
Mass (Da):105,986
Last modified:June 15, 2010 - v1
Checksum:iE41A4A8FAF278B70
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001982 Genomic DNA. Translation: ADF37674.1.
RefSeqiYP_003596024.1. NC_014103.1.

Genome annotation databases

EnsemblBacteriaiADF37674; ADF37674; BMD_0812.
GeneIDi9116203.
KEGGibmd:BMD_0812.
PATRICi37251605. VBIBacMeg104484_0729.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001982 Genomic DNA. Translation: ADF37674.1 .
RefSeqi YP_003596024.1. NC_014103.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADF37674 ; ADF37674 ; BMD_0812 .
GeneIDi 9116203.
KEGGi bmd:BMD_0812.
PATRICi 37251605. VBIBacMeg104484_0729.

Phylogenomic databases

HOGENOMi HOG000238647.
KOi K01595.
OMAi IDIVAQK.

Enzyme and pathway databases

BioCyci BMEG592022:GIVX-812-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequences of the industrial vitamin B12-producers B. megaterium QM B1551 and DSM319 reveal new insights into the Bacillus genome evolution and pan-genome structure."
    Eppinger M., Bunk B., Johns M.A., Edirisinghe J.N., Kutumbaka K.K., Riley D.R., Creasy H.H., Koenig S.S.K., Galens K., Orvis J., Creasy T., Biedendieck R., Braun C., Grayburn S., Jahn D., Ravel J., Vary P.S.
    Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 319.

Entry informationi

Entry nameiD5DB23_BACMD
AccessioniPrimary (citable) accession number: D5DB23
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: June 11, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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