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D5DB23

- D5DB23_BACMD

UniProt

D5DB23 - D5DB23_BACMD

Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Bacillus megaterium (strain DSM 319)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 28 (01 Oct 2014)
      Sequence version 1 (15 Jun 2010)
      Previous versions | rss
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    Functioni

    Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

    Catalytic activityi

    Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

    Cofactori

    Magnesium.UniRule annotationSAAS annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei152 – 1521UniRule annotation
    Active sitei579 – 5791UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-HAMAP
    2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
    3. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbon dioxide fixationUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, PyruvateImported

    Enzyme and pathway databases

    BioCyciBMEG592022:GIVX-812-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
    Short name:
    PEPCUniRule annotation
    Short name:
    PEPCaseUniRule annotation
    Gene namesi
    Name:ppcUniRule annotation
    Ordered Locus Names:BMD_0812Imported
    OrganismiBacillus megaterium (strain DSM 319)Imported
    Taxonomic identifieri592022 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000002365: Chromosome

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PEPCase type 1 family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000238647.
    KOiK01595.
    OMAiIDIVAQK.

    Family and domain databases

    HAMAPiMF_00595. PEPcase_type1.
    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 1 hit.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 1 hit.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D5DB23-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVTVEAAERQ NSSTALRRDV KFLGQLLGKV LVHQGGEELL SKVEKIREVA    50
    KSLRENKDEV IYKEIKNEIV TLEQPMREQV IRAFAVYFHL VNIAEQNHRI 100
    RRRREYQQQE DSIMQPGSLE SAVVSLKNNG VAPDVIANLL QTLSLELIIT 150
    AHPTEATRRS VLDIHKRMAE LLKNLDNPTL TKRERTEIEE RLFSEVLILW 200
    QTNELRDRKP TVMDEVSNGL YYFDETLFEV LPQLHQELEN SLQENYPEEN 250
    WKVPNILRFG SWIGGDRDGN PNVTPKVTWQ TLVKQRKLAI RKYKESLTQL 300
    RQRLSQSTKR VAVSDNLLDS INQEISLLPE KKRWRIKHEV YRCKLTIMLH 350
    KLNLVGESEA GYQRSEELLH DLFLIKDSLQ KHQPQDYQLK SLCKLIRQVE 400
    LFGFHLATLD IRNHSGEHEA AIKEIFHAVS LAEDYSALTE EKKVELLGKV 450
    LQDPRPVISF VENYSKETQQ VIEVFNMIHR AHKEFGERSI EVYLISMTQS 500
    ASDLLEVMVL AKEAGIYRLH ADGRIESKLN IAPLLETIDD LTAGPKIMEQ 550
    LFQLDFYREH LREQQDLQEI MLGYSDGSKD GGTLTANWKL YKAQQEIHDM 600
    AKKYQVRLKF FHGRGGSLGR GGGPLNRSIL SQPVETLGDG VKITEQGEVL 650
    SSRYALYDIA YRSLEQAVSA LLTAAANVSQ EAEQCDIRTH EWEETMDEIS 700
    TASLRKYQEL VFKDPDFLTY FKQATPLPEL GALNIGSRPM SRKGSDRFED 750
    LRAIPWVFAW TQSRQLLPAW YAAGTGLQHL VEKSGDIQLL QQMYKEWPFF 800
    RSTVDNLQMA LTKADLMAAK EYTEMVQDPA ISERIFTAIK KEYNLTKEMI 850
    LQITGQKELM DHLPTIKESI KLRNPYVDPL TFLQVKVISK LREDEAGTLN 900
    EELLKEALLT INGIAAGLRN TG 922
    Length:922
    Mass (Da):105,986
    Last modified:June 15, 2010 - v1
    Checksum:iE41A4A8FAF278B70
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001982 Genomic DNA. Translation: ADF37674.1.
    RefSeqiYP_003596024.1. NC_014103.1.

    Genome annotation databases

    EnsemblBacteriaiADF37674; ADF37674; BMD_0812.
    GeneIDi9116203.
    KEGGibmd:BMD_0812.
    PATRICi37251605. VBIBacMeg104484_0729.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001982 Genomic DNA. Translation: ADF37674.1 .
    RefSeqi YP_003596024.1. NC_014103.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADF37674 ; ADF37674 ; BMD_0812 .
    GeneIDi 9116203.
    KEGGi bmd:BMD_0812.
    PATRICi 37251605. VBIBacMeg104484_0729.

    Phylogenomic databases

    HOGENOMi HOG000238647.
    KOi K01595.
    OMAi IDIVAQK.

    Enzyme and pathway databases

    BioCyci BMEG592022:GIVX-812-MONOMER.

    Family and domain databases

    HAMAPi MF_00595. PEPcase_type1.
    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 1 hit.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 1 hit.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequences of the industrial vitamin B12-producers B. megaterium QM B1551 and DSM319 reveal new insights into the Bacillus genome evolution and pan-genome structure."
      Eppinger M., Bunk B., Johns M.A., Edirisinghe J.N., Kutumbaka K.K., Riley D.R., Creasy H.H., Koenig S.S.K., Galens K., Orvis J., Creasy T., Biedendieck R., Braun C., Grayburn S., Jahn D., Ravel J., Vary P.S.
      Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 319Imported.

    Entry informationi

    Entry nameiD5DB23_BACMD
    AccessioniPrimary (citable) accession number: D5DB23
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 15, 2010
    Last sequence update: June 15, 2010
    Last modified: October 1, 2014
    This is version 28 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3