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D5D5I9 (D5D5I9_ECOKI) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:ECOK1_2171 EMBL ADE91541.1
OrganismEscherichia coli O18:K1:H7 (strain IHE3034 / ExPEC) [Complete proteome] [HAMAP] EMBL ADE91541.1
Taxonomic identifier714962 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length501 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical term3D-structure PDB 3O3V
Complete proteome
Gene Ontology (GO)
   Biological_processantibiotic catabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentouter membrane-bounded periplasmic space

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-lactamase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D5D5I9 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: C3CF745585E53F98

FASTA50155,127
        10         20         30         40         50         60 
MEHVSIKTLY HLLCCMLLFI SAMCALAQEH EPIGAQDERL STLIHQRMQE AKVPALSVSV 

        70         80         90        100        110        120 
TIKGVRQRFV YGVADVASQK ANTLDTVYEL GSMSKAFTGL VVQILIQEGR LRQGDDIITY 

       130        140        150        160        170        180 
LPEMRLNYQG KPASLTVADF LYHTSGLPFS TLARLENPMP GSAVAQQLRN ENLLFAPGAK 

       190        200        210        220        230        240 
FSYASANYDV LGAVIENVTG KTFTEVIAER LTQPLGMSAT VAVKGDEIIV NKASGYKLGF 

       250        260        270        280        290        300 
GKPVLFHAPL ARNHVPAAYI HSTLPDMEIW IDAWLHRKAL PATLREAMSN SWRGNSDVPL 

       310        320        330        340        350        360 
AADNRILYAS GWFIDQNQGP YISHGGQNPN FSSCIALRPD QQIGIVALAN MNSNLILQLC 

       370        380        390        400        410        420 
ADIDNYLRIG KYADGAGDAI TATDTLFVYL TLLLCFWGAV VVVRGAFRVY RATAHGPGKQ 

       430        440        450        460        470        480 
QRLRLRVRDY IIALAVPGLV AAMLYVAPGI LSPGLDWRFI LVWGPSSVLA IPFGIILLAF 

       490        500 
VLTLNHQIKR ILLHNKEWDD E 

« Hide

References

« Hide 'large scale' references
[1]"Identification of protective and broadly conserved vaccine antigens from the genome of extraintestinal pathogenic Escherichia coli."
Moriel D.G., Bertoldi I., Spagnuolo A., Marchi S., Rosini R., Nesta B., Pastorello I., Corea V.A., Torricelli G., Cartocci E., Savino S., Scarselli M., Dobrindt U., Hacker J., Tettelin H., Tallon L.J., Sullivan S., Wieler L.H. expand/collapse author list , Ewers C., Pickard D., Dougan G., Fontana M.R., Rappuoli R., Pizza M., Serino L.
Proc. Natl. Acad. Sci. U.S.A. 107:9072-9077(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: IHE3034 / ExPEC.
[2]"Identification of protective and broadly conserved vaccine antigens from the genome of Extraintestinal Pathogenic Escherichia coli (ExPEC)."
Moriel D.G., Bertoldi I., Spagnuolo A., Marchi S., Rosini R., Nesta B., Pastorello I., Mariani Corea V.A., Torricelli G., Cartocci E., Savino S., Scarselli M., Dobrindt U., Hacker J., Tettelin H., Wieler L.H., Ewers C., Picard D. expand/collapse author list , Dougan G., Fontana M.R., Rappuoli R., Pizza M., Serino L.
Proc. Natl. Acad. Sci. U.S.A. 0:0-0(2010)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: IHE3034.
[3]"ClbP x-ray structure, the prototype of a peptidase family associated to NRP production."
Dubois D., Baron O., Cougnoux A., Delmas J., Pradel N., Nougayrede J.P., Robin F., Oswald E., Bonnet R.
Submitted (JUL-2010) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (2.40 ANGSTROMS) OF 38-372.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001969 Genomic DNA. Translation: ADE91541.1.
RefSeqYP_006101336.1. NC_017628.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3O3VX-ray2.40A/B/C38-372[»]
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

MEROPSS12.010.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADE91541; ADE91541; ECOK1_2171.
GeneID12690739.
KEGGeih:ECOK1_2171.
PATRIC36705781. VBIEscCol148715_2208.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000009875.

Enzyme and pathway databases

BioCycECOL714962:GI9T-2171-MONOMER.

Family and domain databases

Gene3D3.40.710.10. 1 hit.
InterProIPR001466. Beta-lactam-related.
IPR012338. Beta-lactam/transpept-like.
IPR001586. Beta-lactam_class-C_AS.
[Graphical view]
PfamPF00144. Beta-lactamase. 1 hit.
[Graphical view]
SUPFAMSSF56601. SSF56601. 1 hit.
PROSITEPS00336. BETA_LACTAMASE_C. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceD5D5I9.

Entry information

Entry nameD5D5I9_ECOKI
AccessionPrimary (citable) accession number: D5D5I9
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: October 16, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)