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D5D4V4

- D5D4V4_ECOKI

UniProt

D5D4V4 - D5D4V4_ECOKI

Protein
Submitted name:

Alpha-amylase, cytoplasmic

Gene

amyA

Organism
Escherichia coli O18:K1:H7 (strain IHE3034 / ExPEC)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 1 (15 Jun 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseImported, Hydrolase

    Enzyme and pathway databases

    BioCyciECOL714962:GI9T-2045-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-amylase, cytoplasmicImported (EC:3.2.1.1Imported)
    Gene namesi
    Name:amyAImported
    Ordered Locus Names:ECOK1_2045Imported
    OrganismiEscherichia coli O18:K1:H7 (strain IHE3034 / ExPEC)Imported
    Taxonomic identifieri714962 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000002364: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD5D4V4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000094847.
    KOiK01176.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR013776. A-amylase_thermo.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D5D4V4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRNPTLLQCF HWYYPEGGKL WPELAERADG FNDIGINMVW LPPAYKGASG    50
    GYSVGYDSYD LFDLGEFDQK GCIPTKYGDK AQLLAAIDAL KRNDIAVLLD 100
    VVVNHKMGAD EKEAIRVQRV NADDRTQIDE EIIECEGWTR YTFPARAGQY 150
    SQFIWDFKCF SGIDHIEHPD EDGIFKIVND YTGEGWNDQV DDELGNFDYL 200
    MGENIDFRNH AVTEEIKYWA RWVMEQTQCD GFRLDAVKHI PAWFYKEWIE 250
    HVQEVAPKPL FIVAEYWSHE VDKLQTYIDQ VEGKTMLFDA PLQMKFHEAS 300
    RMGRDYDMTQ IFTGTLVEAD PFHAVTLVAN HDTQPLQALE APVEPWFKPL 350
    AYALILLREN GVPSVFYPDL YGAHYEDVGG DGQTYPIDMP IIEQLDELIL 400
    ARQRFAHGVQ TLFFDHPNCI AFSRSGTDEY PGCVVVMSNG DDGEKTIHLG 450
    ENYGNKTWRD FLGNRQESVV TDENGEATFF CNGGSVSVWV IEEVI 495
    Length:495
    Mass (Da):56,625
    Last modified:June 15, 2010 - v1
    Checksum:i3D86F6FD3217DA34
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001969 Genomic DNA. Translation: ADE90034.1.
    RefSeqiYP_006101225.1. NC_017628.1.

    Genome annotation databases

    EnsemblBacteriaiADE90034; ADE90034; ECOK1_2045.
    GeneIDi12690613.
    KEGGieih:ECOK1_2045.
    PATRICi36705514. VBIEscCol148715_2083.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001969 Genomic DNA. Translation: ADE90034.1 .
    RefSeqi YP_006101225.1. NC_017628.1.

    3D structure databases

    ProteinModelPortali D5D4V4.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADE90034 ; ADE90034 ; ECOK1_2045 .
    GeneIDi 12690613.
    KEGGi eih:ECOK1_2045.
    PATRICi 36705514. VBIEscCol148715_2083.

    Phylogenomic databases

    HOGENOMi HOG000094847.
    KOi K01176.

    Enzyme and pathway databases

    BioCyci ECOL714962:GI9T-2045-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR013776. A-amylase_thermo.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: IHE3034 / ExPECImported.
    2. "Identification of protective and broadly conserved vaccine antigens from the genome of Extraintestinal Pathogenic Escherichia coli (ExPEC)."
      Moriel D.G., Bertoldi I., Spagnuolo A., Marchi S., Rosini R., Nesta B., Pastorello I., Mariani Corea V.A., Torricelli G., Cartocci E., Savino S., Scarselli M., Dobrindt U., Hacker J., Tettelin H., Wieler L.H., Ewers C., Picard D.
      , Dougan G., Fontana M.R., Rappuoli R., Pizza M., Serino L.
      Proc. Natl. Acad. Sci. U.S.A. 0:0-0(2010)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: IHE3034.

    Entry informationi

    Entry nameiD5D4V4_ECOKI
    AccessioniPrimary (citable) accession number: D5D4V4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 15, 2010
    Last sequence update: June 15, 2010
    Last modified: October 1, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3