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D5CTF8

- D5CTF8_SIDLE

UniProt

D5CTF8 - D5CTF8_SIDLE

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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Slit_0022

Organism
Sideroxydans lithotrophicus (strain ES-1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciSLIT580332:GH9F-22-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Slit_0022Imported
OrganismiSideroxydans lithotrophicus (strain ES-1)Imported
Taxonomic identifieri580332 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaGallionellalesGallionellaceaeSideroxydans
ProteomesiUP000001625: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD5CTF8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000230831.
KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01339. RuBisCO_L_type2.
InterProiIPR020871. RuBisCO.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5CTF8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDQSNRYSNL DLKEADLIKG GKHILVAYKM KPKDGHGYLE AAAHFAAESS
60 70 80 90 100
TGTNVEVSTT DDFTKGVDAL VYYIDEATED MRIAYPLELF DRNVTDGRFM
110 120 130 140 150
LVSFLTLAIG NNQGMGDIEH AKMVDFYMPE RAIQMFDGPA TDISNLWRIL
160 170 180 190 200
GRPIKDGGYI SGTIIKPKLG LRPEPFAKAA YQFWLGGDFI KNDEPQGNQT
210 220 230 240 250
FCPLKKVLPL VYDALKRAQD ETGQAKLFSM NITADDHYEM CARADYALEV
260 270 280 290 300
FGPDADKLAF LVDGYVGGPG MVTTARRQYP GQYLHYHRAG HGAVTSPSAK
310 320 330 340 350
RGYTAFVLAK MSRLQGASGI HVGTMGYGKM EGEGDDRNIA YMIERDECQG
360 370 380 390 400
PVYFQKWYGM KPTTPIISGG MNALRLPGFF QNLGHGNVIN TAGGGSYGHI
410 420 430 440 450
DSPAAGAISL RQAYECWKSG ADPIQYAKQH KEFARAFESF PKDADKLYPG

WREKLGVHK
Length:459
Mass (Da):50,751
Last modified:June 15, 2010 - v1
Checksum:i217B5AFA9287FAB8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001965 Genomic DNA. Translation: ADE10264.1.
RefSeqiYP_003522651.1. NC_013959.1.

Genome annotation databases

EnsemblBacteriaiADE10264; ADE10264; Slit_0022.
GeneIDi8890677.
KEGGislt:Slit_0022.
PATRICi35398124. VBISidLit69165_0022.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001965 Genomic DNA. Translation: ADE10264.1 .
RefSeqi YP_003522651.1. NC_013959.1.

3D structure databases

ProteinModelPortali D5CTF8.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADE10264 ; ADE10264 ; Slit_0022 .
GeneIDi 8890677.
KEGGi slt:Slit_0022.
PATRICi 35398124. VBISidLit69165_0022.

Phylogenomic databases

HOGENOMi HOG000230831.
KOi K01601.

Enzyme and pathway databases

BioCyci SLIT580332:GH9F-22-MONOMER.

Family and domain databases

Gene3Di 3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPi MF_01339. RuBisCO_L_type2.
InterProi IPR020871. RuBisCO.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view ]
Pfami PF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view ]
SUPFAMi SSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEi PS00157. RUBISCO_LARGE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Sideroxydans lithotrophicus ES-1."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Munk A.C., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Emerson D., Woyke T.
    Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ES-1Imported.

Entry informationi

Entry nameiD5CTF8_SIDLE
AccessioniPrimary (citable) accession number: D5CTF8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: October 1, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3