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D5CTF8

- D5CTF8_SIDLE

UniProt

D5CTF8 - D5CTF8_SIDLE

Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Slit_0022

Organism
Sideroxydans lithotrophicus (strain ES-1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (15 Jun 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. magnesium ion binding Source: InterPro
    2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbon fixation Source: InterPro

    Keywords - Molecular functioni

    LyaseImported

    Enzyme and pathway databases

    BioCyciSLIT580332:GH9F-22-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
    Gene namesi
    Ordered Locus Names:Slit_0022Imported
    OrganismiSideroxydans lithotrophicus (strain ES-1)Imported
    Taxonomic identifieri580332 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaGallionellalesGallionellaceaeSideroxydans
    ProteomesiUP000001625: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD5CTF8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000230831.
    KOiK01601.

    Family and domain databases

    Gene3Di3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    HAMAPiMF_01339. RuBisCO_L_type2.
    InterProiIPR020871. RuBisCO.
    IPR020878. RuBisCo_large_chain_AS.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    IPR017444. RuBisCO_lsu_N.
    [Graphical view]
    PfamiPF00016. RuBisCO_large. 1 hit.
    PF02788. RuBisCO_large_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D5CTF8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDQSNRYSNL DLKEADLIKG GKHILVAYKM KPKDGHGYLE AAAHFAAESS    50
    TGTNVEVSTT DDFTKGVDAL VYYIDEATED MRIAYPLELF DRNVTDGRFM 100
    LVSFLTLAIG NNQGMGDIEH AKMVDFYMPE RAIQMFDGPA TDISNLWRIL 150
    GRPIKDGGYI SGTIIKPKLG LRPEPFAKAA YQFWLGGDFI KNDEPQGNQT 200
    FCPLKKVLPL VYDALKRAQD ETGQAKLFSM NITADDHYEM CARADYALEV 250
    FGPDADKLAF LVDGYVGGPG MVTTARRQYP GQYLHYHRAG HGAVTSPSAK 300
    RGYTAFVLAK MSRLQGASGI HVGTMGYGKM EGEGDDRNIA YMIERDECQG 350
    PVYFQKWYGM KPTTPIISGG MNALRLPGFF QNLGHGNVIN TAGGGSYGHI 400
    DSPAAGAISL RQAYECWKSG ADPIQYAKQH KEFARAFESF PKDADKLYPG 450
    WREKLGVHK 459
    Length:459
    Mass (Da):50,751
    Last modified:June 15, 2010 - v1
    Checksum:i217B5AFA9287FAB8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001965 Genomic DNA. Translation: ADE10264.1.
    RefSeqiYP_003522651.1. NC_013959.1.

    Genome annotation databases

    EnsemblBacteriaiADE10264; ADE10264; Slit_0022.
    GeneIDi8890677.
    KEGGislt:Slit_0022.
    PATRICi35398124. VBISidLit69165_0022.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001965 Genomic DNA. Translation: ADE10264.1 .
    RefSeqi YP_003522651.1. NC_013959.1.

    3D structure databases

    ProteinModelPortali D5CTF8.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADE10264 ; ADE10264 ; Slit_0022 .
    GeneIDi 8890677.
    KEGGi slt:Slit_0022.
    PATRICi 35398124. VBISidLit69165_0022.

    Phylogenomic databases

    HOGENOMi HOG000230831.
    KOi K01601.

    Enzyme and pathway databases

    BioCyci SLIT580332:GH9F-22-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    HAMAPi MF_01339. RuBisCO_L_type2.
    InterProi IPR020871. RuBisCO.
    IPR020878. RuBisCo_large_chain_AS.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    IPR017444. RuBisCO_lsu_N.
    [Graphical view ]
    Pfami PF00016. RuBisCO_large. 1 hit.
    PF02788. RuBisCO_large_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    PROSITEi PS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Sideroxydans lithotrophicus ES-1."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Munk A.C., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Emerson D., Woyke T.
      Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ES-1Imported.

    Entry informationi

    Entry nameiD5CTF8_SIDLE
    AccessioniPrimary (citable) accession number: D5CTF8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 15, 2010
    Last sequence update: June 15, 2010
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3