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D5CTF8 (D5CTF8_SIDLE) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL ADE10264.1
Gene names
Ordered Locus Names:Slit_0022 EMBL ADE10264.1
OrganismSideroxydans lithotrophicus (strain ES-1) [Complete proteome] [HAMAP] EMBL ADE10264.1
Taxonomic identifier580332 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaGallionellalesGallionellaceaeSideroxydans

Protein attributes

Sequence length459 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Ontologies

Keywords
   Molecular functionLyase EMBL ADE10264.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D5CTF8 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: 217B5AFA9287FAB8

FASTA45950,751
        10         20         30         40         50         60 
MDQSNRYSNL DLKEADLIKG GKHILVAYKM KPKDGHGYLE AAAHFAAESS TGTNVEVSTT 

        70         80         90        100        110        120 
DDFTKGVDAL VYYIDEATED MRIAYPLELF DRNVTDGRFM LVSFLTLAIG NNQGMGDIEH 

       130        140        150        160        170        180 
AKMVDFYMPE RAIQMFDGPA TDISNLWRIL GRPIKDGGYI SGTIIKPKLG LRPEPFAKAA 

       190        200        210        220        230        240 
YQFWLGGDFI KNDEPQGNQT FCPLKKVLPL VYDALKRAQD ETGQAKLFSM NITADDHYEM 

       250        260        270        280        290        300 
CARADYALEV FGPDADKLAF LVDGYVGGPG MVTTARRQYP GQYLHYHRAG HGAVTSPSAK 

       310        320        330        340        350        360 
RGYTAFVLAK MSRLQGASGI HVGTMGYGKM EGEGDDRNIA YMIERDECQG PVYFQKWYGM 

       370        380        390        400        410        420 
KPTTPIISGG MNALRLPGFF QNLGHGNVIN TAGGGSYGHI DSPAAGAISL RQAYECWKSG 

       430        440        450 
ADPIQYAKQH KEFARAFESF PKDADKLYPG WREKLGVHK 

« Hide

References

[1]"Complete sequence of Sideroxydans lithotrophicus ES-1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Munk A.C., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Emerson D., Woyke T.
Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ES-1 EMBL ADE10264.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001965 Genomic DNA. Translation: ADE10264.1.
RefSeqYP_003522651.1. NC_013959.1.

3D structure databases

ProteinModelPortalD5CTF8.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADE10264; ADE10264; Slit_0022.
GeneID8890677.
KEGGslt:Slit_0022.
PATRIC35398124. VBISidLit69165_0022.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000230831.
KOK01601.

Enzyme and pathway databases

BioCycSLIT580332:GH9F-22-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPMF_01339. RuBisCO_L_type2.
InterProIPR020871. RuBisCO.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5CTF8_SIDLE
AccessionPrimary (citable) accession number: D5CTF8
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: February 19, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)