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D5CQ60 (D5CQ60_SIDLE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL ADE11224.1
Gene names
Ordered Locus Names:Slit_0986 EMBL ADE11224.1
OrganismSideroxydans lithotrophicus (strain ES-1) [Complete proteome] [HAMAP] EMBL ADE11224.1
Taxonomic identifier580332 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaGallionellalesGallionellaceaeSideroxydans

Protein attributes

Sequence length118 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ADE11224.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D5CQ60 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: 5E90271EB86452E0

FASTA11813,647
        10         20         30         40         50         60 
MSEVMDYKSR LSDPASRKFE TFSYLPAMTA DQIKKQVEYL VSKGWNPAIE HIEPEYLMDS 

        70         80         90        100        110 
YWYMWKLPMF GETDVTKVLA EAEACHKANP NNHVRLIGYN NFNQSQGAAM VIFRGKTV 

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References

[1]"Complete sequence of Sideroxydans lithotrophicus ES-1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Munk A.C., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Emerson D., Woyke T.
Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ES-1 EMBL ADE11224.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001965 Genomic DNA. Translation: ADE11224.1.
RefSeqYP_003523611.1. NC_013959.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADE11224; ADE11224; Slit_0986.
GeneID8891658.
KEGGslt:Slit_0986.
PATRIC35400072. VBISidLit69165_0979.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000141332.
KOK01602.

Enzyme and pathway databases

BioCycSLIT580332:GH9F-1003-MONOMER.

Family and domain databases

Gene3D3.30.190.10. 1 hit.
InterProIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMSSF55239. SSF55239. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD5CQ60_SIDLE
AccessionPrimary (citable) accession number: D5CQ60
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: April 16, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)