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D5CBH1 (D5CBH1_ENTCC) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length461 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. HAMAP-Rule MF_00455 RuleBase RU000609 SAAS SAAS001998

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP-Rule MF_00455

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00455 RuleBase RU000610 SAAS SAAS001998

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00455 RuleBase RU000610 SAAS SAAS001998.

Sequence similarities

Belongs to the xylose isomerase family. HAMAP-Rule MF_00455 RuleBase RU000609

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1221 By similarity HAMAP-Rule MF_00455
Active site1251 By similarity HAMAP-Rule MF_00455
Metal binding2531Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2891Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2891Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2921Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3171Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding3281Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3301Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3601Magnesium 1 By similarity HAMAP-Rule MF_00455

Sequences

Sequence LengthMass (Da)Tools
D5CBH1 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: BFD58C9651FA53E3

FASTA46152,261
        10         20         30         40         50         60 
MSIHYYSCIN DSPHTLIMEL NMQAYFDQLD RVRYEGPKTT NPLAFRHYNP DELVLGKRME 

        70         80         90        100        110        120 
DHLRFAACYW HTFCWNGADM FGVGSFDRPW QQPGEAIELA KRKADVAFEF FHKLNVPYYC 

       130        140        150        160        170        180 
FHDVDVSPEG ASLKEYLNNF AQMVDVLAAK QQQSGVKLLW GTANCFTNPR YGAGAATNPD 

       190        200        210        220        230        240 
PEVFSWAATQ VVTAMNATHQ LGGENYVLWG GREGYETLLN TDLRQEREQI GRFMQMVVEH 

       250        260        270        280        290        300 
KHKIGFRGTL LIEPKPQEPT KHQYDYDVAT VYGFLKQFGL EKEIKVNIEA NHATLAGHSF 

       310        320        330        340        350        360 
HHEIASAIAL GIFGSVDANR GDAQLGWDTD QFPNSVEENA LVMYEIIKAG GFTTGGLNFD 

       370        380        390        400        410        420 
AKVRRQSTDK YDLFYGHIGA MDTMALALKV AARMIEDGEL DKRVAKRYSG WNSELGQQIL 

       430        440        450        460 
KGQLSLAEIA KYAEQHQLAP QHQSGHQELL ENLVNHYLFD K 

« Hide

References

[1]"Complete genome sequence of Enterobacter cloacae subsp. cloacae type strain ATCC 13047."
Ren Y., Ren Y., Zhou Z., Guo X., Li Y., Feng L., Wang L.
J. Bacteriol. 192:2463-2464(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 13047 / DSM 30054 / NBRC 13535 / NCDC 279-56.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001918 Genomic DNA. Translation: ADF59769.1.
RefSeqYP_003610718.1. NC_014121.1.

3D structure databases

ProteinModelPortalD5CBH1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADF59769; ADF59769; ECL_00201.
GeneID9122712.
KEGGenc:ECL_00201.
PATRIC38451431. VBIEntClo148801_0494.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000252293.
KOK01805.

Enzyme and pathway databases

BioCycECLO716541:GH13-202-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
HAMAPMF_00455. Xylose_isom_A.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. SSF51658. 1 hit.
TIGRFAMsTIGR02630. xylose_isom_A. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5CBH1_ENTCC
AccessionPrimary (citable) accession number: D5CBH1
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: June 11, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)