ID   D5C2B5_NITHN            Unreviewed;       379 AA.
AC   D5C2B5;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   27-MAR-2024, entry version 57.
DE   SubName: Full=ATP dependent DNA ligase {ECO:0000313|EMBL:ADE14774.1};
GN   OrderedLocusNames=Nhal_1642 {ECO:0000313|EMBL:ADE14774.1};
OS   Nitrosococcus halophilus (strain Nc4).
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales; Chromatiaceae;
OC   Nitrosococcus.
OX   NCBI_TaxID=472759 {ECO:0000313|EMBL:ADE14774.1, ECO:0000313|Proteomes:UP000001844};
RN   [1] {ECO:0000313|Proteomes:UP000001844}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Nc4 {ECO:0000313|Proteomes:UP000001844};
RG   US DOE Joint Genome Institute;
RA   Campbell M.A., Malfatti S.A., Chain P.S.G., Heidelberg J.F., Ward B.B.,
RA   Klotz M.G.;
RT   "Complete genome sequence of Nitrosococcus halophilus Nc4, a salt-adapted,
RT   aerobic obligate ammonia-oxidizing sulfur purple bacterium.";
RL   Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP001798; ADE14774.1; -; Genomic_DNA.
DR   AlphaFoldDB; D5C2B5; -.
DR   STRING; 472759.Nhal_1642; -.
DR   KEGG; nhl:Nhal_1642; -.
DR   eggNOG; COG1423; Bacteria.
DR   HOGENOM; CLU_061502_0_0_6; -.
DR   Proteomes; UP000001844; Chromosome.
DR   GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR   CDD; cd07894; Adenylation_RNA_ligase; 1.
DR   Gene3D; 3.10.450.740; -; 1.
DR   Gene3D; 3.30.1490.70; -; 1.
DR   Gene3D; 3.30.70.2160; -; 1.
DR   Gene3D; 3.30.470.30; DNA ligase/mRNA capping enzyme; 1.
DR   InterPro; IPR041596; Lig_Pab1020_C.
DR   InterPro; IPR021122; RNA_ligase_dom_REL/Rnl2.
DR   InterPro; IPR001072; RNA_ligase_Pab1020.
DR   NCBIfam; TIGR01209; RNA ligase; 1.
DR   Pfam; PF18330; Lig_C; 1.
DR   Pfam; PF09414; RNA_ligase; 1.
DR   PRINTS; PR01048; Y414FAMILY.
DR   SUPFAM; SSF56091; DNA ligase/mRNA capping enzyme, catalytic domain; 1.
PE   4: Predicted;
KW   Ligase {ECO:0000313|EMBL:ADE14774.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001844}.
FT   DOMAIN          85..230
FT                   /note="RNA ligase"
FT                   /evidence="ECO:0000259|Pfam:PF09414"
FT   DOMAIN          253..375
FT                   /note="RNA ligase Pab1020 C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF18330"
SQ   SEQUENCE   379 AA;  43580 MW;  612EB163ECE42AB8 CRC64;
     MVGVERLVMQ KLDRTLKNSL HQAKAKGRLR RERFGDLVYH RLADDSRPLT RGTVIFEDGT
     LIPGYPQIGR VMRLDKGLKE QFRGSFWAEE KVDGYNVRIF LLGERLLGVT RGGFLCPFTV
     DRLPDLIDRR IFSEHPELTL CAEIAGPENP YLVGSPPFIQ EDIQLFVFDG QRKGELDYLS
     QTEKRQLIEH YHLPSVQNFG CFKAEDLSAI KQLMIRLNNE GREGLVFKED IPGGKQSKYV
     TSEASLSDIE AMTRYLQDLP PEYFIGRILR LVMFLDEEGI GNTRELKTQL GAAFVEGVFK
     AIEQCQRENR VYHRFRCRLR NRSNGRQLLA HLGRGDGHLQ IVEHRLEQEG EFYVLEFDKV
     FQRTTGLLGE LLSGGVVYD
//