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D5C1B8 (D5C1B8_NITHN) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Ribulose-bisphosphate carboxylase EMBL ADE16470.1
EC=4.1.1.39 EMBL ADE16470.1
Gene names
Ordered Locus Names:Nhal_3443 EMBL ADE16470.1
OrganismNitrosococcus halophilus (strain Nc4) [Complete proteome] [HAMAP] EMBL ADE16470.1
Taxonomic identifier472759 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Chromatiales › Chromatiaceae › Nitrosococcus ›

Protein attributes

Sequence length144 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ADE16470.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D5C1B8 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: E41E93801CEC4D45

FASTA14416,771
        10         20         30         40         50         60 
MMTNHGNRIT QGQFSFLPDL TDDQILAQIK YALKNNWAVN VEYTDDPHPR NTYWEMFGMP 

        70         80         90        100        110        120 
MFDLKDPAGI LMEVNDCRKT FPNHYIRVTA FNSDRGVESP CMSFIVNRPE NEPGFGLVRQ 

       130        140 
EVEGRHINYT VRSYATDKPE GERY

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References

[1]"Complete genome sequence of Nitrosococcus halophilus Nc4, a salt-adapted, aerobic obligate ammonia-oxidizing sulfur purple bacterium."
US DOE Joint Genome Institute
Campbell M.A., Malfatti S.A., Chain P.S.G., Heidelberg J.F., Ward B.B., Klotz M.G.
Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Nc4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001798 Genomic DNA. Translation: ADE16470.1.
RefSeqYP_003528857.1. NC_013960.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADE16470; ADE16470; Nhal_3443.
GeneID8918454.
KEGGnhl:Nhal_3443.
PATRIC35397004. VBINitHal115488_3613.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000141331.
KOK01602.

Enzyme and pathway databases

BioCycNHAL472759:GHH2-3490-MONOMER.

Family and domain databases

Gene3D3.30.190.10. 1 hit.
InterProIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMSSF55239. RuBisCO_small. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD5C1B8_NITHN
AccessionPrimary (citable) accession number: D5C1B8
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: May 1, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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