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D5C1B3 (D5C1B3_NITHN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL ADE16465.1
Gene names
Ordered Locus Names:Nhal_3436 EMBL ADE16465.1
OrganismNitrosococcus halophilus (strain Nc4) [Complete proteome] [HAMAP] EMBL ADE16465.1
Taxonomic identifier472759 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus

Protein attributes

Sequence length119 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ADE16465.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D5C1B3 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: D8838F55BE576E28

FASTA11913,928
        10         20         30         40         50         60 
MSEMHDYQSS LGDPSSRRFE TFSYLPEMDT DQIRKQVEYI VSKGWNPAIE HTEPENAFSY 

        70         80         90        100        110 
YWYMWKLPMF GETDVDTILA EAEACHKAHP THHVRLIGYD NYKQSQGAAM VIFRGPMKN 

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References

[1]"Complete genome sequence of Nitrosococcus halophilus Nc4, a salt-adapted, aerobic obligate ammonia-oxidizing sulfur purple bacterium."
US DOE Joint Genome Institute
Campbell M.A., Malfatti S.A., Chain P.S.G., Heidelberg J.F., Ward B.B., Klotz M.G.
Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Nc4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001798 Genomic DNA. Translation: ADE16465.1.
RefSeqYP_003528852.1. NC_013960.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADE16465; ADE16465; Nhal_3436.
GeneID8918447.
KEGGnhl:Nhal_3436.
PATRIC35396990. VBINitHal115488_3606.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000141332.
KOK01602.

Enzyme and pathway databases

BioCycNHAL472759:GHH2-3483-MONOMER.

Family and domain databases

Gene3D3.30.190.10. 1 hit.
InterProIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMSSF55239. SSF55239. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD5C1B3_NITHN
AccessionPrimary (citable) accession number: D5C1B3
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: April 16, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)