D5BW20 (D5BW20_NITHN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Peptidoglycan glycosyltransferase EMBL ADE13670.1
EC=2.4.1.129 EMBL ADE13670.1

Gene names

Ordered Locus Names:

Nhal_0484 EMBL ADE13670.1

Organism

Nitrosococcus halophilus (strain Nc4) [Complete proteome] [HAMAP] EMBL ADE13670.1

Taxonomic identifier

472759 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Chromatiales › Chromatiaceae › Nitrosococcus › Nitrosococcus halophilus

Protein attributes

Sequence length	567 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ADE13670.1
Molecular function	Glycosyltransferase EMBL ADE13670.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	peptidoglycan-based cell wall biogenesis Inferred from electronic annotation. Source: InterPro
Molecular_function	penicillin binding Inferred from electronic annotation. Source: InterPro peptidoglycan glycosyltransferase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 29	29	Potential EMBL ADE13670.1
	Chain	30 – 567	538	Potential		PRO_5000582066

Sequences

	Sequence		Length	Mass (Da)
	D5BW20 [UniParc]. Last modified June 15, 2010. Version 1. Checksum: 1934DD9C5B8EF229	FASTA	567	62,233
	10 20 30 40 50 60 MSRGRNKGYP ARLGVVGLVF AVAAVGLAWR LVELQVFNRD FLRGEGEARH LRVVEVPAHR 70 80 90 100 110 120 GMITDRHGEP LAVSTPVASV WFNPQLLREA RERWPALAKA VGVSTAYLSR RIKEGGEREF 130 140 150 160 170 180 VYLKRWVEPN VARQVQALDI PGVNLQSEYR RYYPAGSVAA HVVGFTNIDD RGQEGLELAF 190 200 210 220 230 240 DKTLQGVPGK KRVIRDSRGR VVEDVENLRV PRPGQDLRLS IDLRLQYLAY RELKAAVRTH 250 260 270 280 290 300 NARAGSLVIL DVDTGEVLAM VNRPSYNPND RSQLKSHLYR NRAVTDLFEP GSTIKPFTIG 310 320 330 340 350 360 VALESGKYHP HTPIDTTPGY FRVGRHVIRD IRNYGRVDVS TVIKKSSNVG ASKIALSLDS 370 380 390 400 410 420 QRLWQGFAQA GLGASTASGF PGEAEGHLPD PFSFRQIEQA TLAFGYGLSV TTLQLARAYA 430 440 450 460 470 480 ALGAGGELKP VSFLHREQAA GGRQVWSEST VSALLSMLEE VVSEGGTGER AHVPSYRVAG 490 500 510 520 530 540 KTGTVKKAIR GGYADERYVS LFAGLIPASR PRLAAVVLID EPQGKIYYGG QVAAPVFSRV 550 560 MVGAMRLLNI APDNLHPLRL AERENRG

References

[1]

"Complete genome sequence of Nitrosococcus halophilus Nc4, a salt-adapted, aerobic obligate ammonia-oxidizing sulfur purple bacterium." US DOE Joint Genome Institute Campbell M.A., Malfatti S.A., Chain P.S.G., Heidelberg J.F., Ward B.B., Klotz M.G. Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Nc4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001798 Genomic DNA. Translation: ADE13670.1.
RefSeq	YP_003526057.1. NC_013960.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADE13670; ADE13670; Nhal_0484.
GeneID	8915454.
KEGG	nhl:Nhal_0484.
PATRIC	35390834. VBINitHal115488_0568.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000049554.
KO	K03587.
Enzyme and pathway databases
BioCyc	NHAL472759:GHH2-490-MONOMER.
Family and domain databases
Gene3D	3.40.710.10. 1 hit.
InterPro	IPR012338. Beta-lactam/transpept-like. IPR005311. PBP_dimer. IPR001460. PCN-bd_Tpept. [Graphical view]
Pfam	PF03717. PBP_dimer. 1 hit. PF00905. Transpeptidase. 1 hit. [Graphical view]
SUPFAM	SSF56519. PBP_dimer. 1 hit. SSF56601. PBP_transp_fold. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D5BW20_NITHN

Accession

Primary (citable) accession number: D5BW20

Entry history

Integrated into UniProtKB/TrEMBL:	June 15, 2010
Last sequence update:	June 15, 2010
Last modified:	May 1, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)