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D5BW20

- D5BW20_NITHN

UniProt

D5BW20 - D5BW20_NITHN

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Protein
Submitted name:

Peptidoglycan glycosyltransferase

Gene
Nhal_0484
Organism
Nitrosococcus halophilus (strain Nc4)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. penicillin binding Source: InterPro
  2. peptidoglycan glycosyltransferase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

GlycosyltransferaseImported, Transferase

Enzyme and pathway databases

BioCyciNHAL472759:GHH2-490-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Peptidoglycan glycosyltransferaseImported (EC:2.4.1.129Imported)
Gene namesi
Ordered Locus Names:Nhal_0484Imported
OrganismiNitrosococcus halophilus (strain Nc4)Imported
Taxonomic identifieri472759 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus
ProteomesiUP000001844: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2929 PredictedImportedAdd
BLAST
Chaini30 – 567538 PredictedImportedPRO_5000582066Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliD5BW20.

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000049554.
KOiK03587.
OMAiRILVCAN.

Family and domain databases

Gene3Di3.40.710.10. 1 hit.
InterProiIPR012338. Beta-lactam/transpept-like.
IPR005311. PBP_dimer.
IPR001460. PCN-bd_Tpept.
[Graphical view]
PfamiPF03717. PBP_dimer. 1 hit.
PF00905. Transpeptidase. 1 hit.
[Graphical view]
SUPFAMiSSF56519. SSF56519. 1 hit.
SSF56601. SSF56601. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

D5BW20-1 [UniParc]FASTAAdd to Basket

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MSRGRNKGYP ARLGVVGLVF AVAAVGLAWR LVELQVFNRD FLRGEGEARH    50
LRVVEVPAHR GMITDRHGEP LAVSTPVASV WFNPQLLREA RERWPALAKA 100
VGVSTAYLSR RIKEGGEREF VYLKRWVEPN VARQVQALDI PGVNLQSEYR 150
RYYPAGSVAA HVVGFTNIDD RGQEGLELAF DKTLQGVPGK KRVIRDSRGR 200
VVEDVENLRV PRPGQDLRLS IDLRLQYLAY RELKAAVRTH NARAGSLVIL 250
DVDTGEVLAM VNRPSYNPND RSQLKSHLYR NRAVTDLFEP GSTIKPFTIG 300
VALESGKYHP HTPIDTTPGY FRVGRHVIRD IRNYGRVDVS TVIKKSSNVG 350
ASKIALSLDS QRLWQGFAQA GLGASTASGF PGEAEGHLPD PFSFRQIEQA 400
TLAFGYGLSV TTLQLARAYA ALGAGGELKP VSFLHREQAA GGRQVWSEST 450
VSALLSMLEE VVSEGGTGER AHVPSYRVAG KTGTVKKAIR GGYADERYVS 500
LFAGLIPASR PRLAAVVLID EPQGKIYYGG QVAAPVFSRV MVGAMRLLNI 550
APDNLHPLRL AERENRG 567
Length:567
Mass (Da):62,233
Last modified:June 15, 2010 - v1
Checksum:i1934DD9C5B8EF229
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001798 Genomic DNA. Translation: ADE13670.1.
RefSeqiYP_003526057.1. NC_013960.1.

Genome annotation databases

EnsemblBacteriaiADE13670; ADE13670; Nhal_0484.
GeneIDi8915454.
KEGGinhl:Nhal_0484.
PATRICi35390834. VBINitHal115488_0568.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001798 Genomic DNA. Translation: ADE13670.1 .
RefSeqi YP_003526057.1. NC_013960.1.

3D structure databases

ProteinModelPortali D5BW20.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADE13670 ; ADE13670 ; Nhal_0484 .
GeneIDi 8915454.
KEGGi nhl:Nhal_0484.
PATRICi 35390834. VBINitHal115488_0568.

Phylogenomic databases

HOGENOMi HOG000049554.
KOi K03587.
OMAi RILVCAN.

Enzyme and pathway databases

BioCyci NHAL472759:GHH2-490-MONOMER.

Family and domain databases

Gene3Di 3.40.710.10. 1 hit.
InterProi IPR012338. Beta-lactam/transpept-like.
IPR005311. PBP_dimer.
IPR001460. PCN-bd_Tpept.
[Graphical view ]
Pfami PF03717. PBP_dimer. 1 hit.
PF00905. Transpeptidase. 1 hit.
[Graphical view ]
SUPFAMi SSF56519. SSF56519. 1 hit.
SSF56601. SSF56601. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Nitrosococcus halophilus Nc4, a salt-adapted, aerobic obligate ammonia-oxidizing sulfur purple bacterium."
    US DOE Joint Genome Institute
    Campbell M.A., Malfatti S.A., Chain P.S.G., Heidelberg J.F., Ward B.B., Klotz M.G.
    Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Nc4.

Entry informationi

Entry nameiD5BW20_NITHN
AccessioniPrimary (citable) accession number: D5BW20
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: May 14, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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