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D5BW20

- D5BW20_NITHN

UniProt

D5BW20 - D5BW20_NITHN

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Protein
Submitted name:

Peptidoglycan glycosyltransferase

Gene

Nhal_0484

Organism
Nitrosococcus halophilus (strain Nc4)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. penicillin binding Source: InterPro
  2. peptidoglycan glycosyltransferase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

GlycosyltransferaseImported, Transferase

Enzyme and pathway databases

BioCyciNHAL472759:GHH2-490-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Peptidoglycan glycosyltransferaseImported (EC:2.4.1.129Imported)
Gene namesi
Ordered Locus Names:Nhal_0484Imported
OrganismiNitrosococcus halophilus (strain Nc4)Imported
Taxonomic identifieri472759 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus
ProteomesiUP000001844: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2929 PotentialImportedAdd
BLAST
Chaini30 – 567538 PotentialImportedPRO_5000582066Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliD5BW20.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000049554.
KOiK03587.
OMAiRILVCAN.

Family and domain databases

Gene3Di3.40.710.10. 1 hit.
InterProiIPR012338. Beta-lactam/transpept-like.
IPR005311. PBP_dimer.
IPR001460. PCN-bd_Tpept.
[Graphical view]
PfamiPF03717. PBP_dimer. 1 hit.
PF00905. Transpeptidase. 1 hit.
[Graphical view]
SUPFAMiSSF56519. SSF56519. 1 hit.
SSF56601. SSF56601. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

D5BW20-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSRGRNKGYP ARLGVVGLVF AVAAVGLAWR LVELQVFNRD FLRGEGEARH
60 70 80 90 100
LRVVEVPAHR GMITDRHGEP LAVSTPVASV WFNPQLLREA RERWPALAKA
110 120 130 140 150
VGVSTAYLSR RIKEGGEREF VYLKRWVEPN VARQVQALDI PGVNLQSEYR
160 170 180 190 200
RYYPAGSVAA HVVGFTNIDD RGQEGLELAF DKTLQGVPGK KRVIRDSRGR
210 220 230 240 250
VVEDVENLRV PRPGQDLRLS IDLRLQYLAY RELKAAVRTH NARAGSLVIL
260 270 280 290 300
DVDTGEVLAM VNRPSYNPND RSQLKSHLYR NRAVTDLFEP GSTIKPFTIG
310 320 330 340 350
VALESGKYHP HTPIDTTPGY FRVGRHVIRD IRNYGRVDVS TVIKKSSNVG
360 370 380 390 400
ASKIALSLDS QRLWQGFAQA GLGASTASGF PGEAEGHLPD PFSFRQIEQA
410 420 430 440 450
TLAFGYGLSV TTLQLARAYA ALGAGGELKP VSFLHREQAA GGRQVWSEST
460 470 480 490 500
VSALLSMLEE VVSEGGTGER AHVPSYRVAG KTGTVKKAIR GGYADERYVS
510 520 530 540 550
LFAGLIPASR PRLAAVVLID EPQGKIYYGG QVAAPVFSRV MVGAMRLLNI
560
APDNLHPLRL AERENRG
Length:567
Mass (Da):62,233
Last modified:June 15, 2010 - v1
Checksum:i1934DD9C5B8EF229
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001798 Genomic DNA. Translation: ADE13670.1.
RefSeqiWP_013031565.1. NC_013960.1.
YP_003526057.1. NC_013960.1.

Genome annotation databases

EnsemblBacteriaiADE13670; ADE13670; Nhal_0484.
GeneIDi8915454.
KEGGinhl:Nhal_0484.
PATRICi35390834. VBINitHal115488_0568.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001798 Genomic DNA. Translation: ADE13670.1 .
RefSeqi WP_013031565.1. NC_013960.1.
YP_003526057.1. NC_013960.1.

3D structure databases

ProteinModelPortali D5BW20.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADE13670 ; ADE13670 ; Nhal_0484 .
GeneIDi 8915454.
KEGGi nhl:Nhal_0484.
PATRICi 35390834. VBINitHal115488_0568.

Phylogenomic databases

HOGENOMi HOG000049554.
KOi K03587.
OMAi RILVCAN.

Enzyme and pathway databases

BioCyci NHAL472759:GHH2-490-MONOMER.

Family and domain databases

Gene3Di 3.40.710.10. 1 hit.
InterProi IPR012338. Beta-lactam/transpept-like.
IPR005311. PBP_dimer.
IPR001460. PCN-bd_Tpept.
[Graphical view ]
Pfami PF03717. PBP_dimer. 1 hit.
PF00905. Transpeptidase. 1 hit.
[Graphical view ]
SUPFAMi SSF56519. SSF56519. 1 hit.
SSF56601. SSF56601. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Nitrosococcus halophilus Nc4, a salt-adapted, aerobic obligate ammonia-oxidizing sulfur purple bacterium."
    US DOE Joint Genome Institute
    Campbell M.A., Malfatti S.A., Chain P.S.G., Heidelberg J.F., Ward B.B., Klotz M.G.
    Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Nc4Imported.

Entry informationi

Entry nameiD5BW20_NITHN
AccessioniPrimary (citable) accession number: D5BW20
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: October 29, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3