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D5BVZ7 (D5BVZ7_NITHN) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Nhal_2491 EMBL ADE15576.1
OrganismNitrosococcus halophilus (strain Nc4) [Complete proteome] [HAMAP] EMBL ADE15576.1
Taxonomic identifier472759 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus

Protein attributes

Sequence length1110 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D5BVZ7 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: FFCD3E719AE5B8DC

FASTA1,110128,361
        10         20         30         40         50         60 
MNQQGEEFSW QDDPLWYKEA IIYQLHVRAF LDSNNDGTGD FQGLTQKLDY IQDLGVNTIW 

        70         80         90        100        110        120 
LLPFYPSPLR DDGYDIADYR NIYPDYGTRR DFRNFVRAAH RRGLRVITEL VINHTSDQHQ 

       130        140        150        160        170        180 
WFQAARKAPP GSAKRNFYVW SNSDQKFPET RIIFTDTETS NWAWDPVAKA YYWHRFFSHQ 

       190        200        210        220        230        240 
PDLNHNNPQV VKAVIRVMRF WLDMGVDGLR LDAIPYLCVR EGTHNENLPE THEVLKQMRA 

       250        260        270        280        290        300 
VVDDHYRHRM FLAEANQWPE DVREYFGDGD ECHMAYHFPL MPRMYMAIAQ EDRHPITEIM 

       310        320        330        340        350        360 
NQTPDIPESC QWAIFLRNHD ELTLEMVTDK ERDYMYQTYA TNPRMRVNVG IRRRLAPLMD 

       370        380        390        400        410        420 
NDLDKIQLMN SLLLSMPGSP IIYYGDEIGM GENIYLGDRN GVRTPMQWSP DRNAGFSKAD 

       430        440        450        460        470        480 
PQRLYLPPIM DPIYGYEAVN VEAQSRDPSS LLNWMKRLLA VRKNTQAFGR GTLKFLRPGN 

       490        500        510        520        530        540 
RKILAYVREY GGEAILCVAN LSRYAQPVEL DLSRFKGRVP LEMMGHTPFP PIGELPYLLT 

       550        560        570        580        590        600 
LPSHGFYWFR LATDVEEPSW HEERLPPLEL PVLVLFAGWD SLFPSRVDPP RKRMSEKLCG 

       610        620        630        640        650        660 
QLEQLLRDFL ITQRWFAAKG EEVERVRLEQ MEEWTEEAGS WLLARVRVEF ADIEVQSYFI 

       670        680        690        700        710        720 
PLALAWGEGD EEPIRRLLPS TIAKIRRQAR IGILYDALAD VSFSRALVTA MGQHREIPFG 

       730        740        750        760        770        780 
AGKLKFSPTA AFEKLVNGVS LQQLWRPAME GTNSTLILDN RLFLKIYRHL QEGINPEQEM 

       790        800        810        820        830        840 
GHFLTEASPF PNIVPLAGTL ESLGPEGTPM TLALLQGFVP NQGDAWAYTV DYLERFLENS 

       850        860        870        880        890        900 
LAKPLEEAAI EFGETHNNYL RMIRILGQRT GELHQALAKE TGNPAFDPEP INSADLDSWR 

       910        920        930        940        950        960 
KHIEKDIEQT LKMLEQRRSE FSEPLRTEVD CLLALKETLR QRLALIPPEL RAVKTRYHGD 

       970        980        990       1000       1010       1020 
YHLGQVLVAE DDFVIIDFEG EPARPLAERR IKHSPLRDVA GMLRSFNYAT AVALRHCTVE 

      1030       1040       1050       1060       1070       1080 
RPEDRGLLLP LAHTWERQVG ESFLAGYGEA AAGCPSYPAD PEHAHYLIEL FILEKALYEL 

      1090       1100       1110 
RYELDNRPEW VDVPLNGLLE FLEEEENPGE 

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References

[1]"Complete genome sequence of Nitrosococcus halophilus Nc4, a salt-adapted, aerobic obligate ammonia-oxidizing sulfur purple bacterium."
US DOE Joint Genome Institute
Campbell M.A., Malfatti S.A., Chain P.S.G., Heidelberg J.F., Ward B.B., Klotz M.G.
Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Nc4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001798 Genomic DNA. Translation: ADE15576.1.
RefSeqYP_003527963.1. NC_013960.1.

3D structure databases

ProteinModelPortalD5BVZ7.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADE15576; ADE15576; Nhal_2491.
GeneID8917491.
KEGGnhl:Nhal_2491.
PATRIC35395002. VBINitHal115488_2623.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000268420.
KOK05343.
OMARRGKHSP.

Enzyme and pathway databases

BioCycNHAL472759:GHH2-2527-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR002575. Aminoglycoside_PTrfase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF01636. APH. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 1 hit.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD5BVZ7_NITHN
AccessionPrimary (citable) accession number: D5BVZ7
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: May 14, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)