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D5BVY9

- D5BVY9_NITHN

UniProt

D5BVY9 - D5BVY9_NITHN

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Protein

Phosphoenolpyruvate carboxylase

Gene
ppc, Nhal_2483
Organism
Nitrosococcus halophilus (strain Nc4)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotations

Cofactori

Magnesium By similarity.UniRule annotationSAAS annotations

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei157 – 1571 By similarityUniRule annotation
Active sitei591 – 5911 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, PyruvateImported

Enzyme and pathway databases

BioCyciNHAL472759:GHH2-2519-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:Nhal_2483Imported
OrganismiNitrosococcus halophilus (strain Nc4)Imported
Taxonomic identifieri472759 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus
ProteomesiUP000001844: Chromosome

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000238647.
KOiK01595.
OMAiTIITHRE.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5BVY9-1 [UniParc]FASTAAdd to Basket

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MKHEYKLDIK AEESGLSEPL AKQLTLLGTL LEQAIRDQAG PKMLNLMGKL    50
HQLCGQVDTQ DNATLCEGAD TQIQKLSRDQ IVWLLHAYTS FFHLANQAEQ 100
QEIIRINWER VRQSRIDKPR PESIDEAIHH LQKQGYAREQ VLQLLGQLDI 150
QPTLTAHPTE ARRRSILFKQ QRISGLLAGL NQYSSTTPPE TERILDDLYN 200
QIALLLATDE VRAERPTVKQ EIHQGLYFMR IAIWEVAVQI YRDTQRALQQ 250
YYGEAPDFPP FLHYRSWIGG DRDGNPHVTP EITRWTIITH RETALRRYCT 300
ELQELYHELS LSERQVGIPP ALYRSLEQDA RETTLGHKFS EQLQREPYRL 350
KISYMMARLG KLLKPPNQTE TGENTYNSKR FIEDLQLLKR CLEESGFGKI 400
SRHGRLGRLL ILTQTFGFHL AALDVRQHSH IHEKAVAALL QIAGITRDYL 450
ALSEKERLAV LSAQLQKPHP LRVPNSVLPE STQQVLETFA VIRDAIAQEP 500
EAIGSYVISM THTISDLLEV MLLAKEAQLW QLQDGKVICP LDFVPLFETI 550
EALEAADKRM LALIKHPIYR QQIAARGHFQ EIMLGYSDSS KDGGYWMANW 600
ALHKAQKRLG KLCHQQKIDF RLFHGRGGTV GRGGGRTSQT AILAMPPAVH 650
NGRIRFTEQG EVISFRYALP AMARRHTEQI VNAMIQATAV AAQSGDKPSD 700
DSYHEDLMER IAQQAMGAYR TLIEQDGFWS WYTQVTPIEH ISHLPIASRP 750
ISRTSATEVD FKNLRAIPWV FAWTQTRYLV PGWFGLGQAL QKIMGDETLQ 800
ETLQKMYQQW PFFNTVIDDA QREMARARLK TASHYARLAN QNETRFHDII 850
VADFEKARKI ILEMSGQQEL LDNTPTIQKT IIFRNPYTDV LNLLQIELMK 900
RYRQAPENEK GLLRQALFLS LNGIAAAMQS TG 932
Length:932
Mass (Da):106,722
Last modified:June 15, 2010 - v1
Checksum:iD3175662C7E2BFD4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001798 Genomic DNA. Translation: ADE15568.1.
RefSeqiWP_013033428.1. NC_013960.1.
YP_003527955.1. NC_013960.1.

Genome annotation databases

EnsemblBacteriaiADE15568; ADE15568; Nhal_2483.
GeneIDi8917483.
KEGGinhl:Nhal_2483.
PATRICi35394984. VBINitHal115488_2614.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001798 Genomic DNA. Translation: ADE15568.1 .
RefSeqi WP_013033428.1. NC_013960.1.
YP_003527955.1. NC_013960.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADE15568 ; ADE15568 ; Nhal_2483 .
GeneIDi 8917483.
KEGGi nhl:Nhal_2483.
PATRICi 35394984. VBINitHal115488_2614.

Phylogenomic databases

HOGENOMi HOG000238647.
KOi K01595.
OMAi TIITHRE.

Enzyme and pathway databases

BioCyci NHAL472759:GHH2-2519-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Nitrosococcus halophilus Nc4, a salt-adapted, aerobic obligate ammonia-oxidizing sulfur purple bacterium."
    US DOE Joint Genome Institute
    Campbell M.A., Malfatti S.A., Chain P.S.G., Heidelberg J.F., Ward B.B., Klotz M.G.
    Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Nc4.

Entry informationi

Entry nameiD5BVY9_NITHN
AccessioniPrimary (citable) accession number: D5BVY9
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: September 3, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3