D5BV10 (D5BV10_NITHN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414

Gene names

Ordered Locus Names:

Nhal_2272 EMBL ADE15360.1

Organism

Nitrosococcus halophilus (strain Nc4) [Complete proteome] [HAMAP] EMBL ADE15360.1

Taxonomic identifier

472759 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Chromatiales › Chromatiaceae › Nitrosococcus › Nitrosococcus halophilus

Protein attributes

Sequence length	193 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414
Sequence similarities	Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU000414 EMBL ADE15360.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D5BV10 [UniParc]. Last modified June 15, 2010. Version 1. Checksum: FDB3B632E35C0184	FASTA	193	21,720
	10 20 30 40 50 60 MSHRLPELPY AMNALEPHIS QETLEYHYGK HHQTYVDKLN GLVPGTEFEN ASLEEIITKA 70 80 90 100 110 120 SGAIFNNGAQ IWNHTFYWNC LAPQGGEEPN GALMDAIREN FGSFADFKEK FSQSAITLFG 130 140 150 160 170 180 SGWAWLVKNP DGSLDIVGTS NAGNPLTEGK TPLLTCDVWE HAYYIDYRNA RPKYLEAFWN 190 LANWDFVAKN LAS

References

[1]

"Complete genome sequence of Nitrosococcus halophilus Nc4, a salt-adapted, aerobic obligate ammonia-oxidizing sulfur purple bacterium." US DOE Joint Genome Institute Campbell M.A., Malfatti S.A., Chain P.S.G., Heidelberg J.F., Ward B.B., Klotz M.G. Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Nc4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001798 Genomic DNA. Translation: ADE15360.1.
RefSeq	YP_003527747.1. NC_013960.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADE15360; ADE15360; Nhal_2272.
GeneID	8917268.
KEGG	nhl:Nhal_2272.
PATRIC	35394546. VBINitHal115488_2399.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000013584.
KO	K04564.
Enzyme and pathway databases
BioCyc	NHAL472759:GHH2-2304-MONOMER.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019833. Mn/Fe_SOD_BS. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
PROSITE	PS00088. SOD_MN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D5BV10_NITHN

Accession

Primary (citable) accession number: D5BV10

Entry history

Integrated into UniProtKB/TrEMBL:	June 15, 2010
Last sequence update:	June 15, 2010
Last modified:	May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)