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D5BUA8 (D5BUA8_PUNMI) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length202 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. HAMAP-Rule MF_00124 SAAS SAAS020634

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124 SAAS SAAS020633

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124 SAAS SAAS020633.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124 RuleBase RU004165

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding9 – 168ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding92 – 954ATP By similarity HAMAP-Rule MF_00124

Sites

Active site931Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1501Zinc By similarity HAMAP-Rule MF_00124
Metal binding1521Zinc By similarity HAMAP-Rule MF_00124
Metal binding1871Zinc By similarity HAMAP-Rule MF_00124
Metal binding1901Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
D5BUA8 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: 9E4F3B0FCD246196

FASTA20222,075
        10         20         30         40         50         60 
MAKLYFSYSA MNAGKSTILL QASHNYKERG MNTVLLTARL DDRIGQGEDG KGKIGSRIGL 

        70         80         90        100        110        120 
QADAEMFDDS TDIFALATEL SRDSDIACIM VDEAQFLTIA QVWQLSAIAD ELGIPVMCYG 

       130        140        150        160        170        180 
LRTDFQGQLF DGSATLLAIA DVLREIRTIC HCGRKATMVV RQDADGKPIT DGAQIEIGGN 

       190        200 
DKYVSLCRRH WKAAMAKVAE SD 

« Hide

References

[1]"Complete genome sequence of "Candidatus Puniceispirillum marinum" IMCC1322, a representative of the SAR116 clade in the Alphaproteobacteria."
Oh H.M., Kwon K.K., Kang I., Kang S.G., Lee J.H., Kim S.J., Cho J.C.
J. Bacteriol. 192:3240-3241(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: IMCC1322 EMBL ADE39855.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001751 Genomic DNA. Translation: ADE39855.1.
RefSeqYP_003551939.1. NC_014010.1.

3D structure databases

ProteinModelPortalD5BUA8.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADE39855; ADE39855; SAR116_1612.
GeneID8961949.
KEGGapb:SAR116_1612.
PATRIC35450195. VBIAlpPro78664_1632.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000076391.
KOK00857.
OMARTICHCG.

Enzyme and pathway databases

BioCycPMAR488538:GI1I-1634-MONOMER.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5BUA8_PUNMI
AccessionPrimary (citable) accession number: D5BUA8
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: April 16, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)