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D5BPM7 (D5BPM7_PUNMI) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length662 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D5BPM7 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: 0659407D6387AB0B

FASTA66270,057
        10         20         30         40         50         60 
MTNAASKQNM ANAIRALSMD AVEAAKSGHP GMPMGMADAA TVLFDEHMKF DAADPHWPDR 

        70         80         90        100        110        120 
DRFVLSAGHG SMLIYALLHL TGYKDMTMDE VRNFRQLGSR TAGHPEFGHA TGIETTTGPL 

       130        140        150        160        170        180 
GQGIANAVGM AMAERHLAAR YGDDLVDHHT YVIAGDGCLM EGISHEAASI AGHFGLGKLI 

       190        200        210        220        230        240 
VLFDDNSISI DGSTDLAVSD DISQRFEAYG WQVLSVDGHD MAAVSSALSA AKAHTSQPTI 

       250        260        270        280        290        300 
IRCKTTIGYG APTKAGTAGV HGAPLGGDEI AGARDALGWA HEPFIVPDDI LSDWRDAGRR 

       310        320        330        340        350        360 
GSAEREAWQS RHAASASASA FDAAMTGDFS SDINDAVIAL KNAYAAEPQK LATRVASQKA 

       370        380        390        400        410        420 
IEAIMPACPI LFGGSADLTG SNNTRVAAHE IFDQGRNGNY AGNYIHYGVR EHGMAAAMNG 

       430        440        450        460        470        480 
IALHGGTIPY GGTFMVFTDY CRPSIRLSAL MKQRVIYVMT HDSIGLGEDG PTHQPVEHLS 

       490        500        510        520        530        540 
ALRVIPNLLV FRPGDVVEAA EAWQCALAST TAPSILALSR QGMAQFRHGD MAENKTALGA 

       550        560        570        580        590        600 
YVAVEADGDR AVTLMASGSE VGIAIDAQSK LAAVGIAAAV VSVPCLELFW MQNADYRKAV 

       610        620        630        640        650        660 
LGNSPRIVIE AGMRQCWDRL LSENDGFIGM DSFGASAPIN DLYTHFGITS EAVVEQARAI 


TK

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References

[1]"Complete genome sequence of "Candidatus Puniceispirillum marinum" IMCC1322, a representative of the SAR116 clade in the Alphaproteobacteria."
Oh H.M., Kwon K.K., Kang I., Kang S.G., Lee J.H., Kim S.J., Cho J.C.
J. Bacteriol. 192:3240-3241(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: IMCC1322 EMBL ADE40529.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001751 Genomic DNA. Translation: ADE40529.1.
RefSeqYP_003552613.1. NC_014010.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADE40529; ADE40529; SAR116_2286.
GeneID8962631.
KEGGapb:SAR116_2286.
PATRIC35451577. VBIAlpPro78664_2315.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000225954.
KOK00615.
OMAYAGNYIH.

Enzyme and pathway databases

BioCycPMAR488538:GI1I-2284-MONOMER.

Family and domain databases

Gene3D3.40.50.920. 1 hit.
InterProIPR009014. Transketo_C/Pyr-ferredox_oxred.
IPR015941. Transketolase-like_C.
IPR005475. Transketolase-like_Pyr-bd.
IPR005478. Transketolase_bac-like.
IPR020826. Transketolase_BS.
IPR005474. Transketolase_N.
[Graphical view]
PfamPF02779. Transket_pyr. 1 hit.
PF00456. Transketolase_N. 1 hit.
[Graphical view]
SMARTSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMSSF52922. Transketo_C_like. 1 hit.
TIGRFAMsTIGR00232. tktlase_bact. 1 hit.
PROSITEPS00801. TRANSKETOLASE_1. 1 hit.
PS00802. TRANSKETOLASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5BPM7_PUNMI
AccessionPrimary (citable) accession number: D5BPM7
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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