Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Alpha-amylase, GH13 family protein

Gene

ZPR_2825

Organism
Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciZPRO655815:GI6J-2821-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylase, GH13 family proteinImported
Gene namesi
Ordered Locus Names:ZPR_2825Imported
OrganismiZunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87)Imported
Taxonomic identifieri655815 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeZunongwangia
ProteomesiUP000001654 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi655815.ZPR_2825.

Structurei

3D structure databases

ProteinModelPortaliD5BG32.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000031038.
KOiK01176.
OMAiAFYWDVP.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

D5BG32-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKTFKNKPI FYLLILVIFF SCSSDDDTTT VDPDDDSSIG QPEPVSALNL
60 70 80 90 100
AEYDNGSGVM MQAFYWDVEP RFEWWNTISD KLGSWADAGV NRIWIPPASK
110 120 130 140 150
GQSGGYSMGY DPSDYYDFGE YDQHGTIPTR FGTREDLEQM ISVAHDNDIE
160 170 180 190 200
VIADMVLNHN SGGGLEYNPY REKETYTLFD ETHGNASGMF NRNYEDFYPN
210 220 230 240 250
SVSNYDPGSL FYQETNLDHH RERVQNWLWK DENSVAKYYK NVMGFDGWRF
260 270 280 290 300
DYVLGFEDFV IKDWLEEVGG FSVSELWDGN PGVLRNHIEA TGSGVFDFAA
310 320 330 340 350
FYVMEQAFDR NHDLKGLTND QVWQTNPEKA VTFTANHDTE KDANEDNIIA
360 370 380 390 400
PENKLKAYAF IMTHPGYPTV FYLDYENPEF QEQLNKLIRI HNSLATGSLE
410 420 430 440 450
IIYADNDEYI MQRSGNSENP GLILYMNISA SAKRRTITTS WDSYILMDYS
460 470 480
ENSNYHPKVS EDGEVTIEAP ANSYAIWSIT E
Length:481
Mass (Da):55,165
Last modified:June 15, 2010 - v1
Checksum:i49B2547BEF8B17F6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001650 Genomic DNA. Translation: ADF53145.1.
RefSeqiWP_013072242.1. NC_014041.1.

Genome annotation databases

EnsemblBacteriaiADF53145; ADF53145; ZPR_2825.
KEGGizpr:ZPR_2825.
PATRICi37235022. VBIZunPro130839_2723.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001650 Genomic DNA. Translation: ADF53145.1.
RefSeqiWP_013072242.1. NC_014041.1.

3D structure databases

ProteinModelPortaliD5BG32.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi655815.ZPR_2825.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADF53145; ADF53145; ZPR_2825.
KEGGizpr:ZPR_2825.
PATRICi37235022. VBIZunPro130839_2723.

Phylogenomic databases

HOGENOMiHOG000031038.
KOiK01176.
OMAiAFYWDVP.

Enzyme and pathway databases

BioCyciZPRO655815:GI6J-2821-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The complete genome of Zunongwangia profunda SM-A87 reveals its adaptation to the deep-sea environment and ecological role in sedimentary organic nitrogen degradation."
    Qin Q.L., Zhang X.Y., Wang X.M., Liu G.M., Chen X.L., Xie B.B., Dang H.Y., Zhou B.C., Yu J., Zhang Y.Z.
    BMC Genomics 11:247-247(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 18752 / CCTCC AB 206139 / SM-A87Imported.

Entry informationi

Entry nameiD5BG32_ZUNPS
AccessioniPrimary (citable) accession number: D5BG32
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: July 22, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.