Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Putative cytochrome c-type biogenesis protein

Gene

ccmH

Organism
Yersinia pestis (strain Z176003)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciYPES637386:GKE8-2607-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative cytochrome c-type biogenesis proteinImported
Gene namesi
Name:ccmHImported
Ordered Locus Names:YPZ3_2561Imported
OrganismiYersinia pestis (strain Z176003)Imported
Taxonomic identifieri637386 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000000932: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD5B0J8.
SMRiD5B0J8. Positions 15-96.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000274670.
KOiK02200.
OMAiAIDTYEF.

Family and domain databases

InterProiIPR005616. Cyt_c_biogenesis_CcmH.
[Graphical view]
PfamiPF03918. CcmH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5B0J8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLLSLLLGL ILSWGVLATI DTYRFSSVEQ EQQYRALTEQ LRCPKCQNNS
60 70 80 90 100
IADSNATIAA DMRAKVYELM QQGYSKQQIV DYMVARYGNF VTYEPPVTAA
110 120 130 140 150
TIILWAGPLL FVLIGAAIVV LRARRRVEKE PPLSQQEQQR LQSLLAENSV
160 170
LQNNALQNNK LQEESDRKKP
Length:170
Mass (Da):19,313
Last modified:June 15, 2010 - v1
Checksum:i2B71423CB94A8C15
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001593 Genomic DNA. Translation: ADE65471.1.
RefSeqiYP_003568733.1. NC_014029.1.

Genome annotation databases

EnsemblBacteriaiADE65471; ADE65471; YPZ3_2561.
GeneIDi8992496.
KEGGiypz:YPZ3_2561.
PATRICi35473810. VBIYerPes97410_3599.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001593 Genomic DNA. Translation: ADE65471.1.
RefSeqiYP_003568733.1. NC_014029.1.

3D structure databases

ProteinModelPortaliD5B0J8.
SMRiD5B0J8. Positions 15-96.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADE65471; ADE65471; YPZ3_2561.
GeneIDi8992496.
KEGGiypz:YPZ3_2561.
PATRICi35473810. VBIYerPes97410_3599.

Phylogenomic databases

HOGENOMiHOG000274670.
KOiK02200.
OMAiAIDTYEF.

Enzyme and pathway databases

BioCyciYPES637386:GKE8-2607-MONOMER.

Family and domain databases

InterProiIPR005616. Cyt_c_biogenesis_CcmH.
[Graphical view]
PfamiPF03918. CcmH. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of Yersinia pestis from new plague natural foci in China."
    Hai R., Yu D., Xia L., Zhu X., Liang Y., Shen X., Zhang E., Zhang H.
    Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Z176003.
  2. "Complete genome sequences of Yersinia pestis from natural foci in China."
    Shen X., Wang Q., Xia L., Zhu X., Zhang Z., Liang Y., Cai H., Zhang E., Wei J., Chen C., Song Z., Zhang H., Yu D., Hai R.
    J. Bacteriol. 192:3551-3552(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Z176003Imported.

Entry informationi

Entry nameiD5B0J8_YERPZ
AccessioniPrimary (citable) accession number: D5B0J8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: January 7, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.