D5AVJ5 (D5AVJ5_RHOCB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Nitrous oxide maturation protein NosD EMBL ADE87330.1

Gene names

Name:	nosD EMBL ADE87330.1
Ordered Locus Names:	RCAP_rcp00074 EMBL ADE87330.1

Encoded on

Plasmid pRCB133 EMBL ADE87330.1

Organism

Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) [Complete proteome] [HAMAP] EMBL ADE87330.1

Taxonomic identifier

272942 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Rhodobacter › Rhodobacter capsulatus

Protein attributes

Sequence length	439 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Plasmid EMBL ADE87330.1
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	D5AVJ5 [UniParc]. Last modified June 15, 2010. Version 1. Checksum: D01A042EF3B1EE6C	FASTA	439	47,467
	10 20 30 40 50 60 MRLPCLSLLL ILLACPLQAE TVMVFPGKAA LQGAIATARP GDVLKLAAGS YGPAVIDKSL 70 80 90 100 110 120 TLDGQGGAVI DGNGRGTVLT VTADDVTLRG LTVQNSGRRN EEIDAGIKVV KGVARTLIEG 130 140 150 160 170 180 NLLRDNLHGI DFHGAIDGTA RRNTILGRQD AHMIARGNGF YVWNAPGVLI EDNEVRWGRD 190 200 210 220 230 240 GIFSNASKKD IYRRNTFRDL RFAIHYMYTN DSVVEDNISI GNHLGFAMMY SRRVQVTGNI 250 260 270 280 290 300 SLMDRDHGVM LNSTNDADVI GNLVIGAAKC TFLYDANKNL IAENRFQGCD IGIHYTAGSA 310 320 330 340 350 360 RNAVTGNAFV GNRNQVKYVG TRDLEWSLDG RGNFWSDLAA FDLNGDGFAD QAFRPNDLMD 370 380 390 400 410 420 HILWSQPAAG LLIGAPAVQL IRWSQQSFPA TLPGGIVDSH PLMAPLEIPL APELAAAAAE 430 LGDRWTKDTE EDAETDLAH

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of Rhodobacter capsulatus SB1003." Strnad H., Lapidus A., Vlcek C., Ulbrich P., Paces J., Maltsev N., Kumar V., Kogan Y., Milgram A., Rebrekov D., Mazur M., Cox R., Kyrpides N., Kolar M., Sachova J., Ridl J., Ivanova N., Kapatral V. , Los T., Lykidis A., Mikhailova N., Reznik G., Vasieva O., Fonstein M., Paces V., Haselkorn R. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: SB1003.
[2]	"Complete genome sequence of the photosynthetic purple nonsulfur bacterium Rhodobacter capsulatus SB 1003." Strnad H., Lapidus A., Paces J., Ulbrich P., Vlcek C., Paces V., Haselkorn R. J. Bacteriol. 192:3545-3546(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-309 / NBRC 16581 / SB1003.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001313 Genomic DNA. Translation: ADE87330.1.
RefSeq	YP_003579737.1. NC_014035.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADE87330; ADE87330; RCAP_rcp00074.
GeneID	9006498.
KEGG	rcp:RCAP_rcp00074.
PATRIC	35507447. VBIRhoCap134200_3648.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000286725.
KO	K07218.
OMA	RYGVHYM.
Enzyme and pathway databases
BioCyc	RCAP272942:GJIY-3661-MONOMER.
Family and domain databases
Gene3D	2.160.20.10. 1 hit.
InterPro	IPR006633. Carb-bd_sugar_hydrolysis-dom. IPR026464. NosD_copper_fam. IPR007742. NosD_dom. IPR006626. PbH1. IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Pfam	PF05048. NosD. 1 hit. [Graphical view]
SMART	SM00722. CASH. 2 hits. SM00710. PbH1. 8 hits. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
TIGRFAMs	TIGR04247. NosD_copper_fam. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D5AVJ5_RHOCB

Accession

Primary (citable) accession number: D5AVJ5

Entry history

Integrated into UniProtKB/TrEMBL:	June 15, 2010
Last sequence update:	June 15, 2010
Last modified:	May 1, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)