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D5AU04 (D5AU04_RHOCB) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:RCAP_rcc01698 EMBL ADE85443.1
OrganismRhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) [Complete proteome] [HAMAP] EMBL ADE85443.1
Taxonomic identifier272942 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRhodobacter

Protein attributes

Sequence length1304 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
D5AU04 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: 9EB0404187734E66

FASTA1,304138,397
        10         20         30         40         50         60 
MATILLSAAG AAIGGGFGGT VLGLSGAVIG RAVGATLGRV IDQRLLGSGS QSVETGRVDR 

        70         80         90        100        110        120 
LRLSSASEGE AVGRLWGRMR VAGQVIWATR FFESASVEKS GKGVPRATVT SYSYSLSLAL 

       130        140        150        160        170        180 
ALCEGEILRV GRVWADGSEI EVSGLNMRVY RGGEDQLPDP KIAAVEGAEA APAYRGIAYV 

       190        200        210        220        230        240 
VLEDLQLAPF GNRVPQFTFE VVRAAQGALA EAEPDLTRGL RAVALIPGTG EYALATTPVY 

       250        260        270        280        290        300 
LATGSGVTAT QGVANQNAPG GQTDLVAALE RLDEELPNCG AVSLVVSWFG DDLRCGACDV 

       310        320        330        340        350        360 
KPKVASVAEE GANMPWRVAG LERAGAEEVP RLSGQSVYGG TPADAAVIEA IAALRAAGKA 

       370        380        390        400        410        420 
VTFYPFILMA QLAGNGLPDP WNPGSAQPAL PWRGRITLSV APGRAGSPDG TAAAEAQVAG 

       430        440        450        460        470        480 
FFGAASPGDS AIAGGEVVYS GPEEWSMRRF ILHYAHLCQL AGGVDAFCIG TEMVALTQIR 

       490        500        510        520        530        540 
GPSNSFPAVA AFRQLAGEVK AILGPGCKIG YAADWSEYWG YAPGNGERFF HLDPLWADEN 

       550        560        570        580        590        600 
IDFIGIDNYL PLSDWRDGAD HADAGWGSIH ALDYLRSNIE GGEYYDWFYA APEHRAAQIR 

       610        620        630        640        650        660 
TPITDGDHDE PWIWRAKDLR NWWLNDHHER VGGLRSEVAT AWVPQSKPIW FTEMGCAAID 

       670        680        690        700        710        720 
KGTNQPNKFL DPKSSESGLP HHSDGRRDEL IQMQYLRAMT GYWGEAARNP VSAVYGGPML 

       730        740        750        760        770        780 
DMSRAHVWAW DARPWPQFPL NTALWSDGEN YARGHWISGR AVAQPLASVV AEICGAAGIT 

       790        800        810        820        830        840 
EIDVSGLYGL VRGYTMTGDQ TGRAGLQALM LAYGFEALER DGQLVFRMRD GRVAADLAAA 

       850        860        870        880        890        900 
DLALGEGEAV VETVRAAEAE IAGRVRLAYV EAEGDFEVKA VEAVFPDAAA GAAAGSELSL 

       910        920        930        940        950        960 
ALTRAQAQGI VGRWLAEARV ARDTARFALP PSRGHLGTGD VVRLDLPEGK RRYRIDRVEQ 

       970        980        990       1000       1010       1020 
AGLIQVEAVR VEPGIYAPAD EVEDPASLRP FAAPVPVTAV FLDLPLMKGD EDPVAPHLAV 

      1030       1040       1050       1060       1070       1080 
TATPWPGTVA VWSSDEDAGY ALNASLGTRA VIGQTLTPLF RARPGVWDRG AALRVRLASG 

      1090       1100       1110       1120       1130       1140 
ALDSATAAKV LNGANAMAIG DGSSENWEVF QFAEAALVEG KIWDISLRLR GQLGTDALMP 

      1150       1160       1170       1180       1190       1200 
EVWPEGSVVV ALNGAPEQIL LPSAARGLAR HYRIGAAVRS YDDPSFVHRI EAFAGAGLRP 

      1210       1220       1230       1240       1250       1260 
FSPCHLRAEP GASGWAFRWV RRTRIDGDSW QGYEVPLGET AELYLVRVLE GTAVKREVTV 

      1270       1280       1290       1300 
GEASWSYPAA LQAADGIAGA FTLEVAQVSD VYGPGLAARI TVGA 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Rhodobacter capsulatus SB1003."
Strnad H., Lapidus A., Vlcek C., Ulbrich P., Paces J., Maltsev N., Kumar V., Kogan Y., Milgram A., Rebrekov D., Mazur M., Cox R., Kyrpides N., Kolar M., Sachova J., Ridl J., Ivanova N., Kapatral V. expand/collapse author list , Los T., Lykidis A., Mikhailova N., Reznik G., Vasieva O., Fonstein M., Paces V., Haselkorn R.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SB1003.
[2]"Complete genome sequence of the photosynthetic purple nonsulfur bacterium Rhodobacter capsulatus SB 1003."
Strnad H., Lapidus A., Paces J., Ulbrich P., Vlcek C., Paces V., Haselkorn R.
J. Bacteriol. 192:3545-3546(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-309 / NBRC 16581 / SB1003.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001312 Genomic DNA. Translation: ADE85443.1.
RefSeqYP_003577850.1. NC_014034.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADE85443; ADE85443; RCAP_rcc01698.
GeneID9004521.
KEGGrcp:RCAP_rcc01698.
PATRIC35503528. VBIRhoCap134200_1722.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAHHERIGG.

Enzyme and pathway databases

BioCycRCAP272942:GJIY-1723-MONOMER.

Family and domain databases

InterProIPR017853. Glycoside_hydrolase_SF.
IPR025195. GTA_TIM_dom.
[Graphical view]
PfamPF13547. GTA_TIM. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameD5AU04_RHOCB
AccessionPrimary (citable) accession number: D5AU04
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: October 16, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)