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Protein

Glycerol-3-phosphate dehydrogenase

Gene

glpD

Organism
Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.UniRule annotation

Cofactori

FADUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Keywords - Ligandi

FlavoproteinUniRule annotation

Enzyme and pathway databases

BioCyciRCAP272942:GJIY-3247-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycerol-3-phosphate dehydrogenaseUniRule annotation (EC:1.1.5.3UniRule annotation)
Gene namesi
Name:glpDImported
Ordered Locus Names:RCAP_rcc03203Imported
OrganismiRhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)Imported
Taxonomic identifieri272942 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRhodobacter
ProteomesiUP000002361 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi272942.RCAP_rcc03203.

Structurei

3D structure databases

ProteinModelPortaliD5ARC2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000004811.
KOiK00111.
OMAiKEGMWLN.

Family and domain databases

InterProiIPR006076. FAD-dep_OxRdtase.
IPR000447. G3P_DH_FAD-dep.
[Graphical view]
PfamiPF01266. DAO. 2 hits.
[Graphical view]
PRINTSiPR01001. FADG3PDH.
PROSITEiPS00977. FAD_G3PDH_1. 1 hit.
PS00978. FAD_G3PDH_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5ARC2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDQPGVVDL FIIGGGVNGC GIARDAAGRG LSVTLAEQGD LAQGTSSAST
60 70 80 90 100
KLFHGGLRYL EFFEFRLVRE ALEERETLLV AMPHISWPLR FVLPVHAGIR
110 120 130 140 150
FDTTTPTSRL LNLMFPWMKG RRPAWLLRLG LFLYDSMGGR KILPGTRKLD
160 170 180 190 200
LTRDKIGRAL KPGMGLAWEY SDCWVDDARL VVLNARDAQA RGANVLVGTR
210 220 230 240 250
VTAAARQGDL WRIETEGPAG KAVHLARGLV NAAGPWVGQV LGLIEGPKPA
260 270 280 290 300
AQVRLVRGSH IVTRRLHDDP RALFLQGSDG RIIFIIPYEQ DFSLIGTTEA
310 320 330 340 350
AHEAAPEAAA CSAAERDYLL AFVSQYLAKP VTARDVVWSY AGVRPLYDDG
360 370 380 390 400
ASSATAASRD YVLDLQAGGP VLLNVFGGKI TTYRRLAEAA LAKLAPHFPG
410 420 430 440 450
LGPDWTARVP LPGGDFFQTG VKALIERLRV RYAFLGQAGA GRMVRAYGTE
460 470 480 490 500
AFAILGEAKT RADLGRDFGA GLSEAEVIWL MDREWARRAE DVVWRRTKLG
510 520
LRLSADQIAV LDRFMLERGA R
Length:521
Mass (Da):56,880
Last modified:June 15, 2010 - v1
Checksum:iF2D479433878A64E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001312 Genomic DNA. Translation: ADE86927.1.
RefSeqiWP_013068900.1. NC_014034.1.
YP_003579334.1. NC_014034.1.

Genome annotation databases

EnsemblBacteriaiADE86927; ADE86927; RCAP_rcc03203.
KEGGircp:RCAP_rcc03203.
PATRICi35506618. VBIRhoCap134200_3243.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001312 Genomic DNA. Translation: ADE86927.1.
RefSeqiWP_013068900.1. NC_014034.1.
YP_003579334.1. NC_014034.1.

3D structure databases

ProteinModelPortaliD5ARC2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272942.RCAP_rcc03203.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADE86927; ADE86927; RCAP_rcc03203.
KEGGircp:RCAP_rcc03203.
PATRICi35506618. VBIRhoCap134200_3243.

Phylogenomic databases

HOGENOMiHOG000004811.
KOiK00111.
OMAiKEGMWLN.

Enzyme and pathway databases

BioCyciRCAP272942:GJIY-3247-MONOMER.

Family and domain databases

InterProiIPR006076. FAD-dep_OxRdtase.
IPR000447. G3P_DH_FAD-dep.
[Graphical view]
PfamiPF01266. DAO. 2 hits.
[Graphical view]
PRINTSiPR01001. FADG3PDH.
PROSITEiPS00977. FAD_G3PDH_1. 1 hit.
PS00978. FAD_G3PDH_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of Rhodobacter capsulatus SB1003."
    Strnad H., Lapidus A., Vlcek C., Ulbrich P., Paces J., Maltsev N., Kumar V., Kogan Y., Milgram A., Rebrekov D., Mazur M., Cox R., Kyrpides N., Kolar M., Sachova J., Ridl J., Ivanova N., Kapatral V.
    , Los T., Lykidis A., Mikhailova N., Reznik G., Vasieva O., Fonstein M., Paces V., Haselkorn R.
    Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: SB1003.
  2. "Complete genome sequence of the photosynthetic purple nonsulfur bacterium Rhodobacter capsulatus SB 1003."
    Strnad H., Lapidus A., Paces J., Ulbrich P., Vlcek C., Paces V., Haselkorn R.
    J. Bacteriol. 192:3545-3546(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-309 / NBRC 16581 / SB1003Imported.

Entry informationi

Entry nameiD5ARC2_RHOCB
AccessioniPrimary (citable) accession number: D5ARC2
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: June 24, 2015
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.