D5ARC2 (D5ARC2_RHOCB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycerol-3-phosphate dehydrogenase EMBL ADE86927.1
EC=1.1.5.3 EMBL ADE86927.1

Gene names

Name:	glpD EMBL ADE86927.1
Ordered Locus Names:	RCAP_rcc03203 EMBL ADE86927.1

Organism

Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) [Complete proteome] [HAMAP] EMBL ADE86927.1

Taxonomic identifier

272942 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Rhodobacter › Rhodobacter capsulatus

Protein attributes

Sequence length	521 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	FAD By similarity. RuleBase RU003892
Sequence similarities	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. RuleBase RU003891

Ontologies

Keywords
Ligand	Flavoprotein RuleBase RU003892
Molecular function	Oxidoreductase SAAS SAAS006076 RuleBase RU003892 EMBL ADE86927.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glycerol-3-phosphate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular_component	glycerol-3-phosphate dehydrogenase complex Inferred from electronic annotation. Source: InterPro
Molecular_function	sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D5ARC2 [UniParc]. Last modified June 15, 2010. Version 1. Checksum: F2D479433878A64E	FASTA	521	56,880
	10 20 30 40 50 60 MSDQPGVVDL FIIGGGVNGC GIARDAAGRG LSVTLAEQGD LAQGTSSAST KLFHGGLRYL 70 80 90 100 110 120 EFFEFRLVRE ALEERETLLV AMPHISWPLR FVLPVHAGIR FDTTTPTSRL LNLMFPWMKG 130 140 150 160 170 180 RRPAWLLRLG LFLYDSMGGR KILPGTRKLD LTRDKIGRAL KPGMGLAWEY SDCWVDDARL 190 200 210 220 230 240 VVLNARDAQA RGANVLVGTR VTAAARQGDL WRIETEGPAG KAVHLARGLV NAAGPWVGQV 250 260 270 280 290 300 LGLIEGPKPA AQVRLVRGSH IVTRRLHDDP RALFLQGSDG RIIFIIPYEQ DFSLIGTTEA 310 320 330 340 350 360 AHEAAPEAAA CSAAERDYLL AFVSQYLAKP VTARDVVWSY AGVRPLYDDG ASSATAASRD 370 380 390 400 410 420 YVLDLQAGGP VLLNVFGGKI TTYRRLAEAA LAKLAPHFPG LGPDWTARVP LPGGDFFQTG 430 440 450 460 470 480 VKALIERLRV RYAFLGQAGA GRMVRAYGTE AFAILGEAKT RADLGRDFGA GLSEAEVIWL 490 500 510 520 MDREWARRAE DVVWRRTKLG LRLSADQIAV LDRFMLERGA R

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of Rhodobacter capsulatus SB1003." Strnad H., Lapidus A., Vlcek C., Ulbrich P., Paces J., Maltsev N., Kumar V., Kogan Y., Milgram A., Rebrekov D., Mazur M., Cox R., Kyrpides N., Kolar M., Sachova J., Ridl J., Ivanova N., Kapatral V. , Los T., Lykidis A., Mikhailova N., Reznik G., Vasieva O., Fonstein M., Paces V., Haselkorn R. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: SB1003.
[2]	"Complete genome sequence of the photosynthetic purple nonsulfur bacterium Rhodobacter capsulatus SB 1003." Strnad H., Lapidus A., Paces J., Ulbrich P., Vlcek C., Paces V., Haselkorn R. J. Bacteriol. 192:3545-3546(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-309 / NBRC 16581 / SB1003.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001312 Genomic DNA. Translation: ADE86927.1.
RefSeq	YP_003579334.1. NC_014034.1.
3D structure databases
ProteinModelPortal	D5ARC2.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADE86927; ADE86927; RCAP_rcc03203.
GeneID	9006019.
KEGG	rcp:RCAP_rcc03203.
PATRIC	35506618. VBIRhoCap134200_3243.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000004811.
KO	K00111.
OMA	LMEKEWA.
Enzyme and pathway databases
BioCyc	RCAP272942:GJIY-3247-MONOMER.
Family and domain databases
InterPro	IPR006076. FAD-dep_OxRdtase. IPR000447. G3P_DH_FAD-dep. [Graphical view]
Pfam	PF01266. DAO. 2 hits. [Graphical view]
PRINTS	PR01001. FADG3PDH.
PROSITE	PS00977. FAD_G3PDH_1. 1 hit. PS00978. FAD_G3PDH_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D5ARC2_RHOCB

Accession

Primary (citable) accession number: D5ARC2

Entry history

Integrated into UniProtKB/TrEMBL:	June 15, 2010
Last sequence update:	June 15, 2010
Last modified:	May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)