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D5ARC2 (D5ARC2_RHOCB) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.1.5.3 EMBL ADE86927.1
Gene names
Name:glpD EMBL ADE86927.1
Ordered Locus Names:RCAP_rcc03203 EMBL ADE86927.1
OrganismRhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) [Complete proteome] [HAMAP] EMBL ADE86927.1
Taxonomic identifier272942 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRhodobacter

Protein attributes

Sequence length521 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

FAD By similarity. RuleBase RU003892

Sequence similarities

Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.

Sequences

Sequence LengthMass (Da)Tools
D5ARC2 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: F2D479433878A64E

FASTA52156,880
        10         20         30         40         50         60 
MSDQPGVVDL FIIGGGVNGC GIARDAAGRG LSVTLAEQGD LAQGTSSAST KLFHGGLRYL 

        70         80         90        100        110        120 
EFFEFRLVRE ALEERETLLV AMPHISWPLR FVLPVHAGIR FDTTTPTSRL LNLMFPWMKG 

       130        140        150        160        170        180 
RRPAWLLRLG LFLYDSMGGR KILPGTRKLD LTRDKIGRAL KPGMGLAWEY SDCWVDDARL 

       190        200        210        220        230        240 
VVLNARDAQA RGANVLVGTR VTAAARQGDL WRIETEGPAG KAVHLARGLV NAAGPWVGQV 

       250        260        270        280        290        300 
LGLIEGPKPA AQVRLVRGSH IVTRRLHDDP RALFLQGSDG RIIFIIPYEQ DFSLIGTTEA 

       310        320        330        340        350        360 
AHEAAPEAAA CSAAERDYLL AFVSQYLAKP VTARDVVWSY AGVRPLYDDG ASSATAASRD 

       370        380        390        400        410        420 
YVLDLQAGGP VLLNVFGGKI TTYRRLAEAA LAKLAPHFPG LGPDWTARVP LPGGDFFQTG 

       430        440        450        460        470        480 
VKALIERLRV RYAFLGQAGA GRMVRAYGTE AFAILGEAKT RADLGRDFGA GLSEAEVIWL 

       490        500        510        520 
MDREWARRAE DVVWRRTKLG LRLSADQIAV LDRFMLERGA R 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Rhodobacter capsulatus SB1003."
Strnad H., Lapidus A., Vlcek C., Ulbrich P., Paces J., Maltsev N., Kumar V., Kogan Y., Milgram A., Rebrekov D., Mazur M., Cox R., Kyrpides N., Kolar M., Sachova J., Ridl J., Ivanova N., Kapatral V. expand/collapse author list , Los T., Lykidis A., Mikhailova N., Reznik G., Vasieva O., Fonstein M., Paces V., Haselkorn R.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SB1003.
[2]"Complete genome sequence of the photosynthetic purple nonsulfur bacterium Rhodobacter capsulatus SB 1003."
Strnad H., Lapidus A., Paces J., Ulbrich P., Vlcek C., Paces V., Haselkorn R.
J. Bacteriol. 192:3545-3546(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-309 / NBRC 16581 / SB1003.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001312 Genomic DNA. Translation: ADE86927.1.
RefSeqYP_003579334.1. NC_014034.1.

3D structure databases

ProteinModelPortalD5ARC2.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADE86927; ADE86927; RCAP_rcc03203.
GeneID9006019.
KEGGrcp:RCAP_rcc03203.
PATRIC35506618. VBIRhoCap134200_3243.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000004811.
KOK00111.
OMAHAMEKLS.

Enzyme and pathway databases

BioCycRCAP272942:GJIY-3247-MONOMER.

Family and domain databases

InterProIPR006076. FAD-dep_OxRdtase.
IPR000447. G3P_DH_FAD-dep.
[Graphical view]
PfamPF01266. DAO. 2 hits.
[Graphical view]
PRINTSPR01001. FADG3PDH.
PROSITEPS00977. FAD_G3PDH_1. 1 hit.
PS00978. FAD_G3PDH_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5ARC2_RHOCB
AccessionPrimary (citable) accession number: D5ARC2
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: October 16, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)