D5AL51 (D5AL51_RHOCB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414

Gene names

Name:	sodB EMBL ADE86041.1
Ordered Locus Names:	RCAP_rcc02311 EMBL ADE86041.1

Organism

Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) [Complete proteome] [HAMAP] EMBL ADE86041.1

Taxonomic identifier

272942 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Rhodobacter › Rhodobacter capsulatus

Protein attributes

Sequence length	200 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414
Sequence similarities	Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU000414 EMBL ADE86041.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D5AL51 [UniParc]. Last modified June 15, 2010. Version 1. Checksum: 64A208803386E494	FASTA	200	22,186
	10 20 30 40 50 60 MAFELPALPY AHDALAALGM SKETLEYHHD LHHKAYVDNG NKLIAGTEWE GKSVEEIVKG 70 80 90 100 110 120 TYCAGAVAQS GIFNNASQHW NHAQFWEMMG PGEDKKMPGE LEKALVEAFG SVAKFKEDFA 130 140 150 160 170 180 AAGAAQFGSG WAWLVKDTDG ALKITKTENG VNPLCFGQTA LLGCDVWEHS YYIDFRNKRP 190 200 VYLTNFLDKL VNWENVASRL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of Rhodobacter capsulatus SB1003." Strnad H., Lapidus A., Vlcek C., Ulbrich P., Paces J., Maltsev N., Kumar V., Kogan Y., Milgram A., Rebrekov D., Mazur M., Cox R., Kyrpides N., Kolar M., Sachova J., Ridl J., Ivanova N., Kapatral V. , Los T., Lykidis A., Mikhailova N., Reznik G., Vasieva O., Fonstein M., Paces V., Haselkorn R. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: SB1003.
[2]	"Complete genome sequence of the photosynthetic purple nonsulfur bacterium Rhodobacter capsulatus SB 1003." Strnad H., Lapidus A., Paces J., Ulbrich P., Vlcek C., Paces V., Haselkorn R. J. Bacteriol. 192:3545-3546(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-309 / NBRC 16581 / SB1003.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001312 Genomic DNA. Translation: ADE86041.1.
RefSeq	YP_003578448.1. NC_014034.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADE86041; ADE86041; RCAP_rcc02311.
GeneID	9005130.
KEGG	rcp:RCAP_rcc02311.
PATRIC	35504802. VBIRhoCap134200_2352.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000013584.
KO	K04564.
OMA	MGTETLE.
Enzyme and pathway databases
BioCyc	RCAP272942:GJIY-2339-MONOMER.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019833. Mn/Fe_SOD_BS. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
PROSITE	PS00088. SOD_MN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D5AL51_RHOCB

Accession

Primary (citable) accession number: D5AL51

Entry history

Integrated into UniProtKB/TrEMBL:	June 15, 2010
Last sequence update:	June 15, 2010
Last modified:	May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)