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D5AHG8 (D5AHG8_STRGZ) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Thymidine kinase HAMAP-Rule MF_00124 RuleBase RU000544
EC=2.7.1.21 HAMAP-Rule MF_00124 RuleBase RU000544
Gene names
Name:tdk HAMAP-Rule MF_00124
Ordered Locus Names:SSGZ1_0826 EMBL ADE31283.1
OrganismStreptococcus suis (strain GZ1) [Complete proteome] [HAMAP]
Taxonomic identifier423211 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Lactobacillales › Streptococcaceae › Streptococcus ›

Protein attributes

Sequence length193 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. HAMAP-Rule MF_00124

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124 SAAS SAAS020633

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124 SAAS SAAS020633.

Sequence similarities

Belongs to the thymidine kinase family. RuleBase RU004165 HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding9 – 168ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding85 – 884ATP By similarity HAMAP-Rule MF_00124

Sites

Active site861Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1431Zinc By similarity HAMAP-Rule MF_00124
Metal binding1461Zinc By similarity HAMAP-Rule MF_00124
Metal binding1801Zinc By similarity HAMAP-Rule MF_00124
Metal binding1831Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
D5AHG8 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: BE3F491F4155E359

FASTA19322,105
        10         20         30         40         50         60 
MAQLYYKYGT MNSGKTIEIL KVAHNYEEQG KPVVIMTSAL DTRDAFGVVS SRIGMRRDAV 

        70         80         90        100        110        120 
AIDDDMDIFG FIEKMEPRPY CVLIDEAQFL RRHHVYALAR VVDELDVPVM AFGLKNDFRN 

       130        140        150        160        170        180 
ELFEGSQHLL LLADKLDEIK TICQYCSKKA TMVLRTQDGK PTYEGEQIQI GGNETYIPVC 

       190 
RKHYFSPEIK DLP

« Hide

References

[1]"Clinical, experimental, and genomic differences between intermediately pathogenic, highly pathogenic, and epidemic Streptococcus suis."
Ye C., Zheng H., Zhang J., Jing H., Wang L., Xiong Y., Wang W., Zhou Z., Sun Q., Luo X., Du H., Gottschalk M., Xu J.
J. Infect. Dis. 199:97-107(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: GZ1 EMBL ADE31283.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000837 Genomic DNA. Translation: ADE31283.1.
RefSeqYP_006074225.1. NC_017617.1.

3D structure databases

ProteinModelPortalD5AHG8.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADE31283; ADE31283; SSGZ1_0826.
GeneID12724229.
KEGGssw:SSGZ1_0826.
PATRIC36796261. VBIStrSui127079_0811.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000076391.
KOK00857.

Enzyme and pathway databases

BioCycSSUI423211:GLLL-877-MONOMER.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5AHG8_STRGZ
AccessionPrimary (citable) accession number: D5AHG8
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: February 19, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info