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D5AGM1

- D5AGM1_STRGZ

UniProt

D5AGM1 - D5AGM1_STRGZ

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Protein
Elongation factor Tu
Gene
tuf, SSGZ1_0521
Organism
Streptococcus suis (strain GZ1)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi25 – 328GTP By similarityUniRule annotation
Nucleotide bindingi90 – 945GTP By similarityUniRule annotation
Nucleotide bindingi145 – 1484GTP By similarityUniRule annotation

GO - Molecular functioni

  1. GTP binding Source: UniProtKB-HAMAP
  2. GTPase activity Source: InterPro
  3. translation elongation factor activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotationImported

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciSSUI423211:GLLL-570-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Short name:
EF-TuUniRule annotation
Gene namesi
Name:tufUniRule annotation
Ordered Locus Names:SSGZ1_0521Imported
OrganismiStreptococcus suis (strain GZ1)Imported
Taxonomic identifieri423211 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
ProteomesiUP000002359: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

PTM / Processingi

Proteomic databases

PRIDEiD5AGM1.

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000229290.
KOiK02358.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5AGM1-1 [UniParc]FASTAAdd to Basket

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MEAFTKMAKE KYDRSKPHVN IGTIGHVDHG KTTLTAAITT VLARRLPSSV    50
NQPKDYASID AAPEERERGI TINTAHVEYE TEKRHYAHID APGHADYVKN 100
MITGAAQMDG AILVVASTDG PMPQTREHIL LSRQVGVKHL IVFMNKVDLV 150
DDEELLELVE MEIRDLLSEY DFPGDDLPVI QGSALKALEG DSKYEDIVME 200
LMNTVDEYIP EPERDTDKPL LLPVEDVFSI TGRGTVASGR IDRGTVRVND 250
EIEIVGLQEE KSKAVVTGVE MFRKQLDEGL AGDNVGVLLR GVQRDEIERG 300
QVISKPGSIN PHTKFKGEVY ILTKEEGGRH TPFFDNYRPQ FYFRTTDVTG 350
SIKLPEGTEM VMPGDNVTID VELIHPIAVE QGTTFSIREG GRTVGSGMVT 400
EIEA 404
Length:404
Mass (Da):44,755
Last modified:June 15, 2010 - v1
Checksum:i1009E1BD74A92192
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000837 Genomic DNA. Translation: ADE30986.1.
RefSeqiYP_006073928.1. NC_017617.1.

Genome annotation databases

EnsemblBacteriaiADE30986; ADE30986; SSGZ1_0521.
GeneIDi12723921.
KEGGissw:SSGZ1_0521.
PATRICi36795654. VBIStrSui127079_0511.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000837 Genomic DNA. Translation: ADE30986.1 .
RefSeqi YP_006073928.1. NC_017617.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi D5AGM1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADE30986 ; ADE30986 ; SSGZ1_0521 .
GeneIDi 12723921.
KEGGi ssw:SSGZ1_0521.
PATRICi 36795654. VBIStrSui127079_0511.

Phylogenomic databases

HOGENOMi HOG000229290.
KOi K02358.

Enzyme and pathway databases

BioCyci SSUI423211:GLLL-570-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. EFACTOR_GTP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Clinical, experimental, and genomic differences between intermediately pathogenic, highly pathogenic, and epidemic Streptococcus suis."
    Ye C., Zheng H., Zhang J., Jing H., Wang L., Xiong Y., Wang W., Zhou Z., Sun Q., Luo X., Du H., Gottschalk M., Xu J.
    J. Infect. Dis. 199:97-107(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GZ1Imported.

Entry informationi

Entry nameiD5AGM1_STRGZ
AccessioniPrimary (citable) accession number: D5AGM1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: June 11, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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