Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

D5AGM1

- D5AGM1_STRGZ

UniProt

D5AGM1 - D5AGM1_STRGZ

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Elongation factor Tu

Gene

tuf

Organism
Streptococcus suis (strain GZ1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi25 – 328GTPUniRule annotation
Nucleotide bindingi90 – 945GTPUniRule annotation
Nucleotide bindingi145 – 1484GTPUniRule annotation

GO - Molecular functioni

  1. GTPase activity Source: InterPro
  2. GTP binding Source: UniProtKB-HAMAP
  3. translation elongation factor activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotation

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciSSUI423211:GLLL-570-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Short name:
EF-TuUniRule annotation
Gene namesi
Name:tufUniRule annotation
Ordered Locus Names:SSGZ1_0521Imported
OrganismiStreptococcus suis (strain GZ1)Imported
Taxonomic identifieri423211 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
ProteomesiUP000002359: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

PTM / Processingi

Proteomic databases

PRIDEiD5AGM1.

Interactioni

Subunit structurei

Monomer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000229290.
KOiK02358.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5AGM1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEAFTKMAKE KYDRSKPHVN IGTIGHVDHG KTTLTAAITT VLARRLPSSV
60 70 80 90 100
NQPKDYASID AAPEERERGI TINTAHVEYE TEKRHYAHID APGHADYVKN
110 120 130 140 150
MITGAAQMDG AILVVASTDG PMPQTREHIL LSRQVGVKHL IVFMNKVDLV
160 170 180 190 200
DDEELLELVE MEIRDLLSEY DFPGDDLPVI QGSALKALEG DSKYEDIVME
210 220 230 240 250
LMNTVDEYIP EPERDTDKPL LLPVEDVFSI TGRGTVASGR IDRGTVRVND
260 270 280 290 300
EIEIVGLQEE KSKAVVTGVE MFRKQLDEGL AGDNVGVLLR GVQRDEIERG
310 320 330 340 350
QVISKPGSIN PHTKFKGEVY ILTKEEGGRH TPFFDNYRPQ FYFRTTDVTG
360 370 380 390 400
SIKLPEGTEM VMPGDNVTID VELIHPIAVE QGTTFSIREG GRTVGSGMVT

EIEA
Length:404
Mass (Da):44,755
Last modified:June 15, 2010 - v1
Checksum:i1009E1BD74A92192
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000837 Genomic DNA. Translation: ADE30986.1.
RefSeqiWP_011922079.1. NC_017617.1.
YP_006073928.1. NC_017617.1.

Genome annotation databases

EnsemblBacteriaiADE30986; ADE30986; SSGZ1_0521.
GeneIDi12723921.
KEGGissw:SSGZ1_0521.
PATRICi36795654. VBIStrSui127079_0511.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000837 Genomic DNA. Translation: ADE30986.1 .
RefSeqi WP_011922079.1. NC_017617.1.
YP_006073928.1. NC_017617.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi D5AGM1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADE30986 ; ADE30986 ; SSGZ1_0521 .
GeneIDi 12723921.
KEGGi ssw:SSGZ1_0521.
PATRICi 36795654. VBIStrSui127079_0511.

Phylogenomic databases

HOGENOMi HOG000229290.
KOi K02358.

Enzyme and pathway databases

BioCyci SSUI423211:GLLL-570-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. EFACTOR_GTP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Clinical, experimental, and genomic differences between intermediately pathogenic, highly pathogenic, and epidemic Streptococcus suis."
    Ye C., Zheng H., Zhang J., Jing H., Wang L., Xiong Y., Wang W., Zhou Z., Sun Q., Luo X., Du H., Gottschalk M., Xu J.
    J. Infect. Dis. 199:97-107(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GZ1Imported.

Entry informationi

Entry nameiD5AGM1_STRGZ
AccessioniPrimary (citable) accession number: D5AGM1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: October 29, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3