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D4ZKU4 (D4ZKU4_SHEVD) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:SVI_2322 EMBL BAJ02293.1
OrganismShewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) [Complete proteome] [HAMAP] EMBL BAJ02293.1
Taxonomic identifier637905 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length612 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmetallopeptidase activity

Inferred from electronic annotation. Source: InterPro

peptidyl-dipeptidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D4ZKU4 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: 999D1F19155C0048

FASTA61268,806
        10         20         30         40         50         60 
MSLLMPKLSR LSLLIALSIG VSACNSSKND DSNSASSKTS EAKQFLIQSE QTLSDLSIEI 

        70         80         90        100        110        120 
NRAEWIYSNF ITDDTAALSA SAAEKLTATS VRLATQAAQY TDLALDDTSL RKLNILRSSL 

       130        140        150        160        170        180 
VLPAPLDPEK NAELAGISAQ LNGLYGKGKY CFDDGRCLTQ PELSAIMAES SDPKLLLEVW 

       190        200        210        220        230        240 
QGWREIAKPM RPLFQREVEL ANEGAKDLGY ADLSVLWRSQ YDMKPDEFSN ELDRLWGQVK 

       250        260        270        280        290        300 
PLYDSLHCYV RGELNEEYGD EVVPANGPIP AHLLGNMWAQ SWGNVYDKVS PQDADPGYDL 

       310        320        330        340        350        360 
TQLLAEHDYD EVKMVKQAES FFSSLGFDEL PDSFWERSLF VQPKDRDVVC HASAWDLDNL 

       370        380        390        400        410        420 
DDIRIKMCIQ KTAEDFTVIH HELGHNYYQR AYKNQPFIFK NSANDGFHEA IGDTIALSIT 

       430        440        450        460        470        480 
PSYLKQIGLL DEVPDASKDI GLLLKQALDK VAFMPFGLMI DQWRWKVFSG EITPDQYNQA 

       490        500        510        520        530        540 
WWDLREKYQG VKAPIERSEA DFDPGAKYHV PGNVPYTRYF LAHILQFQFH KSLCETAGDT 

       550        560        570        580        590        600 
GPVHRCSIYG NKAAGSKLNT MLEMGLSRPW PDALKVVTGS PEMDASAVLD YFAPLQVWLN 

       610 
EQNTQAKRQC GW 

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References

[1]"Complete genome sequence and comparative analysis of Shewanella violacea, a psychrophilic and piezophilic bacterium from deep sea floor sediments."
Aono E., Baba T., Ara T., Nishi T., Nakamichi T., Inamoto E., Toyonaga H., Hasegawa M., Takai Y., Okumura Y., Baba M., Tomita M., Kato C., Oshima T., Nakasone K., Mori H.
Mol. Biosyst. 6:1216-1226(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JCM 10179 / CIP 106290 / LMG 19151 / DSS12.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP011177 Genomic DNA. Translation: BAJ02293.1.
RefSeqYP_003557071.1. NC_014012.1.

3D structure databases

ProteinModelPortalD4ZKU4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAJ02293; BAJ02293; SVI_2322.
GeneID8966548.
KEGGsvo:SVI_2322.
PATRIC35460863. VBISheVio92117_2243.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000292210.
KOK01283.
OMAEANRAEW.

Enzyme and pathway databases

BioCycSVIO637905:GCRO-2408-MONOMER.

Family and domain databases

InterProIPR001548. Peptidase_M2.
[Graphical view]
PANTHERPTHR10514. PTHR10514. 1 hit.
PfamPF01401. Peptidase_M2. 1 hit.
[Graphical view]
PRINTSPR00791. PEPDIPTASEA.
ProtoNetSearch...

Entry information

Entry nameD4ZKU4_SHEVD
AccessionPrimary (citable) accession number: D4ZKU4
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: May 14, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)