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D4ZDT0

- D4ZDT0_SHEVD

UniProt

D4ZDT0 - D4ZDT0_SHEVD

Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 30 (01 Oct 2014)
      Sequence version 1 (15 Jun 2010)
      Previous versions | rss
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    Functioni

    Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

    Catalytic activityi

    Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

    Cofactori

    Magnesium.UniRule annotationSAAS annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei138 – 1381UniRule annotation
    Active sitei545 – 5451UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-HAMAP
    2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
    3. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationSAAS annotation

    Keywords - Biological processi

    Carbon dioxide fixationUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, PyruvateImported

    Enzyme and pathway databases

    BioCyciSVIO637905:GCRO-4163-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
    Short name:
    PEPCUniRule annotation
    Short name:
    PEPCaseUniRule annotation
    Gene namesi
    Name:ppcUniRule annotationImported
    Ordered Locus Names:SVI_4020Imported
    OrganismiShewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)Imported
    Taxonomic identifieri637905 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000002350: Chromosome

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PEPCase type 1 family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000238648.
    KOiK01595.
    OMAiELSTISC.

    Family and domain databases

    HAMAPiMF_00595. PEPcase_type1.
    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 1 hit.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 1 hit.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D4ZDT0-1 [UniParc]FASTAAdd to Basket

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    MTDMYASLRS NVGTLGQILG ETIRTNLDDA FLDKIEQIRQ LAKSSRQGDE    50
    ASREEMLKLL AALPDNELVP FAKAFNQFLN LANIAEQFHT ISRNCDELVC 100
    VPDPVEQLLG RVLSSNIDQE DMLDCLQNLD IDLVLTAHPT EISRRTLIQK 150
    YSSVIDSLAA LENPQLTERE KKQQHLRLRQ LIAQIWHTNE IRHERPTPVD 200
    EARWGLSTIE VSLWQAIPDF LRQLNEQVEE RTGKQLPIDI SPVRFSSWMG 250
    GDRDGNPFVT ALVTQEVLDR NRHTAARLYL KDIVLLVNDL SMEDANDELS 300
    SLTKDSHEPY RYVLRELRVK LRNTIDYLND RLEGHNPKVD NSTIIWHEKD 350
    LKEPLMMLYR SLSDKGMSLI ANGLLLDMLR RIACFGIHML RLDIRQDAER 400
    HSDVIAELTR YLGMGDFNHW DESEKQTFLL KELTSKRPLI PTNWQPSDNV 450
    AEVISTCRLI ATQPARALGS YVISMASKPS DVLTVLLLLK ETGCPHPMRV 500
    VPLFETLDDL NNAATCMSAL FAIDWYRGYT KGHQEIMIGY SDSAKDAGVM 550
    AAAWAQYHAQ EQLVEISRQA DVKLTLFHGR GGTIGRGGGP AHEAILSQPP 600
    GSVDGRIRVT EQGEMIRFKF GLPKLAVQSL ALYTSAVMEA TLLPPPEPKP 650
    EWRACIQRLA EESVKAYRSI VREEADFVAY FRAATPEVEL GKLPLGSRPA 700
    KRKVDGGIES LRAIPWIFAW SQNRLMLPAW LGAGEALQAS IDRGDMSLLQ 750
    EMEQEWPFFK TRISMLEMVY SKAEPNLAKY YETCLVPENL HHLGEALRER 800
    LATGIKAVLE LTQSDTLMSH TPWNKESITL RNPYIDPLNF MQAELLARTR 850
    KEDASANVEL ALMLTIAGVA AGMRNTG 877
    Length:877
    Mass (Da):99,058
    Last modified:June 15, 2010 - v1
    Checksum:i9881B6AF89708819
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP011177 Genomic DNA. Translation: BAJ03991.1.
    RefSeqiWP_013053282.1. NC_014012.1.
    YP_003558769.1. NC_014012.1.

    Genome annotation databases

    EnsemblBacteriaiBAJ03991; BAJ03991; SVI_4020.
    GeneIDi8968114.
    KEGGisvo:SVI_4020.
    PATRICi35464220. VBISheVio92117_3861.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP011177 Genomic DNA. Translation: BAJ03991.1 .
    RefSeqi WP_013053282.1. NC_014012.1.
    YP_003558769.1. NC_014012.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAJ03991 ; BAJ03991 ; SVI_4020 .
    GeneIDi 8968114.
    KEGGi svo:SVI_4020.
    PATRICi 35464220. VBISheVio92117_3861.

    Phylogenomic databases

    HOGENOMi HOG000238648.
    KOi K01595.
    OMAi ELSTISC.

    Enzyme and pathway databases

    BioCyci SVIO637905:GCRO-4163-MONOMER.

    Family and domain databases

    HAMAPi MF_00595. PEPcase_type1.
    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 1 hit.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 1 hit.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence and comparative analysis of Shewanella violacea, a psychrophilic and piezophilic bacterium from deep sea floor sediments."
      Aono E., Baba T., Ara T., Nishi T., Nakamichi T., Inamoto E., Toyonaga H., Hasegawa M., Takai Y., Okumura Y., Baba M., Tomita M., Kato C., Oshima T., Nakasone K., Mori H.
      Mol. Biosyst. 6:1216-1226(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JCM 10179 / CIP 106290 / LMG 19151 / DSS12Imported.

    Entry informationi

    Entry nameiD4ZDT0_SHEVD
    AccessioniPrimary (citable) accession number: D4ZDT0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 15, 2010
    Last sequence update: June 15, 2010
    Last modified: October 1, 2014
    This is version 30 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3