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D4ZDT0

- D4ZDT0_SHEVD

UniProt

D4ZDT0 - D4ZDT0_SHEVD

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Protein

Phosphoenolpyruvate carboxylase

Gene
ppc, SVI_4020
Organism
Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity.UniRule annotationSAAS annotations

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotations

Cofactori

Magnesium By similarity.UniRule annotationSAAS annotations

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei138 – 1381 By similarityUniRule annotation
Active sitei545 – 5451 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotations

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, PyruvateImported

Enzyme and pathway databases

BioCyciSVIO637905:GCRO-4163-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotationImported
Ordered Locus Names:SVI_4020Imported
OrganismiShewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)Imported
Taxonomic identifieri637905 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000002350: Chromosome

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000238648.
KOiK01595.
OMAiELSTISC.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D4ZDT0-1 [UniParc]FASTAAdd to Basket

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MTDMYASLRS NVGTLGQILG ETIRTNLDDA FLDKIEQIRQ LAKSSRQGDE    50
ASREEMLKLL AALPDNELVP FAKAFNQFLN LANIAEQFHT ISRNCDELVC 100
VPDPVEQLLG RVLSSNIDQE DMLDCLQNLD IDLVLTAHPT EISRRTLIQK 150
YSSVIDSLAA LENPQLTERE KKQQHLRLRQ LIAQIWHTNE IRHERPTPVD 200
EARWGLSTIE VSLWQAIPDF LRQLNEQVEE RTGKQLPIDI SPVRFSSWMG 250
GDRDGNPFVT ALVTQEVLDR NRHTAARLYL KDIVLLVNDL SMEDANDELS 300
SLTKDSHEPY RYVLRELRVK LRNTIDYLND RLEGHNPKVD NSTIIWHEKD 350
LKEPLMMLYR SLSDKGMSLI ANGLLLDMLR RIACFGIHML RLDIRQDAER 400
HSDVIAELTR YLGMGDFNHW DESEKQTFLL KELTSKRPLI PTNWQPSDNV 450
AEVISTCRLI ATQPARALGS YVISMASKPS DVLTVLLLLK ETGCPHPMRV 500
VPLFETLDDL NNAATCMSAL FAIDWYRGYT KGHQEIMIGY SDSAKDAGVM 550
AAAWAQYHAQ EQLVEISRQA DVKLTLFHGR GGTIGRGGGP AHEAILSQPP 600
GSVDGRIRVT EQGEMIRFKF GLPKLAVQSL ALYTSAVMEA TLLPPPEPKP 650
EWRACIQRLA EESVKAYRSI VREEADFVAY FRAATPEVEL GKLPLGSRPA 700
KRKVDGGIES LRAIPWIFAW SQNRLMLPAW LGAGEALQAS IDRGDMSLLQ 750
EMEQEWPFFK TRISMLEMVY SKAEPNLAKY YETCLVPENL HHLGEALRER 800
LATGIKAVLE LTQSDTLMSH TPWNKESITL RNPYIDPLNF MQAELLARTR 850
KEDASANVEL ALMLTIAGVA AGMRNTG 877
Length:877
Mass (Da):99,058
Last modified:June 15, 2010 - v1
Checksum:i9881B6AF89708819
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP011177 Genomic DNA. Translation: BAJ03991.1.
RefSeqiWP_013053282.1. NC_014012.1.
YP_003558769.1. NC_014012.1.

Genome annotation databases

EnsemblBacteriaiBAJ03991; BAJ03991; SVI_4020.
GeneIDi8968114.
KEGGisvo:SVI_4020.
PATRICi35464220. VBISheVio92117_3861.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP011177 Genomic DNA. Translation: BAJ03991.1 .
RefSeqi WP_013053282.1. NC_014012.1.
YP_003558769.1. NC_014012.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAJ03991 ; BAJ03991 ; SVI_4020 .
GeneIDi 8968114.
KEGGi svo:SVI_4020.
PATRICi 35464220. VBISheVio92117_3861.

Phylogenomic databases

HOGENOMi HOG000238648.
KOi K01595.
OMAi ELSTISC.

Enzyme and pathway databases

BioCyci SVIO637905:GCRO-4163-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence and comparative analysis of Shewanella violacea, a psychrophilic and piezophilic bacterium from deep sea floor sediments."
    Aono E., Baba T., Ara T., Nishi T., Nakamichi T., Inamoto E., Toyonaga H., Hasegawa M., Takai Y., Okumura Y., Baba M., Tomita M., Kato C., Oshima T., Nakasone K., Mori H.
    Mol. Biosyst. 6:1216-1226(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 10179 / CIP 106290 / LMG 19151 / DSS12.

Entry informationi

Entry nameiD4ZDT0_SHEVD
AccessioniPrimary (citable) accession number: D4ZDT0
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: September 3, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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