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D4ZDT0 (D4ZDT0_SHEVD) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length877 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. HAMAP-Rule MF_00595 SAAS SAAS021135

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. HAMAP-Rule MF_00595 SAAS SAAS018129

Cofactor

Magnesium By similarity. HAMAP-Rule MF_00595 SAAS SAAS018129

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00595

Sequence similarities

Belongs to the PEPCase type 1 family. HAMAP-Rule MF_00595

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1381 By similarity HAMAP-Rule MF_00595
Active site5451 By similarity HAMAP-Rule MF_00595

Sequences

Sequence LengthMass (Da)Tools
D4ZDT0 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: 9881B6AF89708819

FASTA87799,058
        10         20         30         40         50         60 
MTDMYASLRS NVGTLGQILG ETIRTNLDDA FLDKIEQIRQ LAKSSRQGDE ASREEMLKLL 

        70         80         90        100        110        120 
AALPDNELVP FAKAFNQFLN LANIAEQFHT ISRNCDELVC VPDPVEQLLG RVLSSNIDQE 

       130        140        150        160        170        180 
DMLDCLQNLD IDLVLTAHPT EISRRTLIQK YSSVIDSLAA LENPQLTERE KKQQHLRLRQ 

       190        200        210        220        230        240 
LIAQIWHTNE IRHERPTPVD EARWGLSTIE VSLWQAIPDF LRQLNEQVEE RTGKQLPIDI 

       250        260        270        280        290        300 
SPVRFSSWMG GDRDGNPFVT ALVTQEVLDR NRHTAARLYL KDIVLLVNDL SMEDANDELS 

       310        320        330        340        350        360 
SLTKDSHEPY RYVLRELRVK LRNTIDYLND RLEGHNPKVD NSTIIWHEKD LKEPLMMLYR 

       370        380        390        400        410        420 
SLSDKGMSLI ANGLLLDMLR RIACFGIHML RLDIRQDAER HSDVIAELTR YLGMGDFNHW 

       430        440        450        460        470        480 
DESEKQTFLL KELTSKRPLI PTNWQPSDNV AEVISTCRLI ATQPARALGS YVISMASKPS 

       490        500        510        520        530        540 
DVLTVLLLLK ETGCPHPMRV VPLFETLDDL NNAATCMSAL FAIDWYRGYT KGHQEIMIGY 

       550        560        570        580        590        600 
SDSAKDAGVM AAAWAQYHAQ EQLVEISRQA DVKLTLFHGR GGTIGRGGGP AHEAILSQPP 

       610        620        630        640        650        660 
GSVDGRIRVT EQGEMIRFKF GLPKLAVQSL ALYTSAVMEA TLLPPPEPKP EWRACIQRLA 

       670        680        690        700        710        720 
EESVKAYRSI VREEADFVAY FRAATPEVEL GKLPLGSRPA KRKVDGGIES LRAIPWIFAW 

       730        740        750        760        770        780 
SQNRLMLPAW LGAGEALQAS IDRGDMSLLQ EMEQEWPFFK TRISMLEMVY SKAEPNLAKY 

       790        800        810        820        830        840 
YETCLVPENL HHLGEALRER LATGIKAVLE LTQSDTLMSH TPWNKESITL RNPYIDPLNF 

       850        860        870 
MQAELLARTR KEDASANVEL ALMLTIAGVA AGMRNTG 

« Hide

References

[1]"Complete genome sequence and comparative analysis of Shewanella violacea, a psychrophilic and piezophilic bacterium from deep sea floor sediments."
Aono E., Baba T., Ara T., Nishi T., Nakamichi T., Inamoto E., Toyonaga H., Hasegawa M., Takai Y., Okumura Y., Baba M., Tomita M., Kato C., Oshima T., Nakasone K., Mori H.
Mol. Biosyst. 6:1216-1226(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JCM 10179 / CIP 106290 / LMG 19151 / DSS12.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP011177 Genomic DNA. Translation: BAJ03991.1.
RefSeqYP_003558769.1. NC_014012.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAJ03991; BAJ03991; SVI_4020.
GeneID8968114.
KEGGsvo:SVI_4020.
PATRIC35464220. VBISheVio92117_3861.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000238648.
KOK01595.
OMAELSTISC.

Enzyme and pathway databases

BioCycSVIO637905:GCRO-4163-MONOMER.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD4ZDT0_SHEVD
AccessionPrimary (citable) accession number: D4ZDT0
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: June 11, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)