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D4ZAE7

- D4ZAE7_SHEVD

UniProt

D4ZAE7 - D4ZAE7_SHEVD

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Protein
Submitted name: Glutamate decarboxylase, putative
Gene
SVI_3021
Organism
Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSVIO637905:GCRO-3126-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glutamate decarboxylase, putativeImported
Gene namesi
Ordered Locus Names:SVI_3021Imported
OrganismiShewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)Imported
Taxonomic identifieri637905 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000002350: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000282553.
KOiK01580.
OMAiGMMHNLV.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

D4ZAE7-1 [UniParc]FASTAAdd to Basket

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MSMTPRRATA SEEALLRIFT VPEAPDSTLS VIEKNISQNL MGFLQESVVA    50
VEKPLSEIEL DFQQHQIPSA PQFVSDYADE MMKTLVAHSV HTSSPSFIGH 100
MTSALPYFVL PLSKMMVGLN QNLVKIETSK AFTPLERQVL GMMHHLIYSE 150
DDKFYKNWMH SANYSLGAFC SGGTIANITA LWTARNQLLK ADGDFKGVSA 200
QGLMKGLRHY GYDDLAILVS ERGHYSLAKT ADLLGIGRDN IIQVPTSSDN 250
KVDVDKMRAM AKQLDLDNIK VMAIVGVAGT TETGNIDPLD ELATLAVELN 300
CHFHVDAAWG GASLLSNKYR HLLKGIERAD SVTIDAHKQM YVPMGAGMVI 350
FKDPAFANAI KHHAEYILRK GSKDLGSQTL EGSRPGMAML VHACLQIIGR 400
DGYEILINNS LEKARYFAEL IHGQDDFQLV SEPELCLLTY RYVPKSVQEA 450
MQETRESGNT EKLIEFNSLL DGLTKFVQKR QREQGTSFVS RTRINPESRA 500
SLNIQSVVFR VVLANPLTTR EILQQVLAEQ IEIAQQDNEF LPQLLALASN 550
Length:550
Mass (Da):61,088
Last modified:June 15, 2010 - v1
Checksum:iC0C217B220F60E5E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP011177 Genomic DNA. Translation: BAJ02992.1.
RefSeqiYP_003557770.1. NC_014012.1.

Genome annotation databases

EnsemblBacteriaiBAJ02992; BAJ02992; SVI_3021.
GeneIDi8968517.
KEGGisvo:SVI_3021.
PATRICi35462233. VBISheVio92117_2910.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP011177 Genomic DNA. Translation: BAJ02992.1 .
RefSeqi YP_003557770.1. NC_014012.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAJ02992 ; BAJ02992 ; SVI_3021 .
GeneIDi 8968517.
KEGGi svo:SVI_3021.
PATRICi 35462233. VBISheVio92117_2910.

Phylogenomic databases

HOGENOMi HOG000282553.
KOi K01580.
OMAi GMMHNLV.

Enzyme and pathway databases

BioCyci SVIO637905:GCRO-3126-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence and comparative analysis of Shewanella violacea, a psychrophilic and piezophilic bacterium from deep sea floor sediments."
    Aono E., Baba T., Ara T., Nishi T., Nakamichi T., Inamoto E., Toyonaga H., Hasegawa M., Takai Y., Okumura Y., Baba M., Tomita M., Kato C., Oshima T., Nakasone K., Mori H.
    Mol. Biosyst. 6:1216-1226(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 10179 / CIP 106290 / LMG 19151 / DSS12.

Entry informationi

Entry nameiD4ZAE7_SHEVD
AccessioniPrimary (citable) accession number: D4ZAE7
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: May 14, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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