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D4ZAE7

- D4ZAE7_SHEVD

UniProt

D4ZAE7 - D4ZAE7_SHEVD

Protein
Submitted name:

Glutamate decarboxylase, putative

Gene

SVI_3021

Organism
Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 24 (01 Oct 2014)
      Sequence version 1 (15 Jun 2010)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. carboxy-lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciSVIO637905:GCRO-3126-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Glutamate decarboxylase, putativeImported
    Gene namesi
    Ordered Locus Names:SVI_3021Imported
    OrganismiShewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)Imported
    Taxonomic identifieri637905 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000002350: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000282553.
    KOiK01580.
    OMAiGMMHNLV.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D4ZAE7-1 [UniParc]FASTAAdd to Basket

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    MSMTPRRATA SEEALLRIFT VPEAPDSTLS VIEKNISQNL MGFLQESVVA    50
    VEKPLSEIEL DFQQHQIPSA PQFVSDYADE MMKTLVAHSV HTSSPSFIGH 100
    MTSALPYFVL PLSKMMVGLN QNLVKIETSK AFTPLERQVL GMMHHLIYSE 150
    DDKFYKNWMH SANYSLGAFC SGGTIANITA LWTARNQLLK ADGDFKGVSA 200
    QGLMKGLRHY GYDDLAILVS ERGHYSLAKT ADLLGIGRDN IIQVPTSSDN 250
    KVDVDKMRAM AKQLDLDNIK VMAIVGVAGT TETGNIDPLD ELATLAVELN 300
    CHFHVDAAWG GASLLSNKYR HLLKGIERAD SVTIDAHKQM YVPMGAGMVI 350
    FKDPAFANAI KHHAEYILRK GSKDLGSQTL EGSRPGMAML VHACLQIIGR 400
    DGYEILINNS LEKARYFAEL IHGQDDFQLV SEPELCLLTY RYVPKSVQEA 450
    MQETRESGNT EKLIEFNSLL DGLTKFVQKR QREQGTSFVS RTRINPESRA 500
    SLNIQSVVFR VVLANPLTTR EILQQVLAEQ IEIAQQDNEF LPQLLALASN 550
    Length:550
    Mass (Da):61,088
    Last modified:June 15, 2010 - v1
    Checksum:iC0C217B220F60E5E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP011177 Genomic DNA. Translation: BAJ02992.1.
    RefSeqiYP_003557770.1. NC_014012.1.

    Genome annotation databases

    EnsemblBacteriaiBAJ02992; BAJ02992; SVI_3021.
    GeneIDi8968517.
    KEGGisvo:SVI_3021.
    PATRICi35462233. VBISheVio92117_2910.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP011177 Genomic DNA. Translation: BAJ02992.1 .
    RefSeqi YP_003557770.1. NC_014012.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAJ02992 ; BAJ02992 ; SVI_3021 .
    GeneIDi 8968517.
    KEGGi svo:SVI_3021.
    PATRICi 35462233. VBISheVio92117_2910.

    Phylogenomic databases

    HOGENOMi HOG000282553.
    KOi K01580.
    OMAi GMMHNLV.

    Enzyme and pathway databases

    BioCyci SVIO637905:GCRO-3126-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence and comparative analysis of Shewanella violacea, a psychrophilic and piezophilic bacterium from deep sea floor sediments."
      Aono E., Baba T., Ara T., Nishi T., Nakamichi T., Inamoto E., Toyonaga H., Hasegawa M., Takai Y., Okumura Y., Baba M., Tomita M., Kato C., Oshima T., Nakasone K., Mori H.
      Mol. Biosyst. 6:1216-1226(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JCM 10179 / CIP 106290 / LMG 19151 / DSS12Imported.

    Entry informationi

    Entry nameiD4ZAE7_SHEVD
    AccessioniPrimary (citable) accession number: D4ZAE7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 15, 2010
    Last sequence update: June 15, 2010
    Last modified: October 1, 2014
    This is version 24 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3