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Protein

Capsid vertex protein gp24

Gene

24

Organism
Escherichia phage AR1 (Bacteriophage AR1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Capsid protein that self-associates to form 11 pentons, building the T=13 laevo capsid in association with 160 hexamers of gp23* and one dodecamer of gp20.By similarity

Names & Taxonomyi

Protein namesi
Recommended name:
Capsid vertex protein gp24By similarity
Alternative name(s):
Gene product 24By similarity
Short name:
gp24By similarity
Cleaved into the following chain:
Capsid vertex protein gp24*By similarity
Gene namesi
Name:24Imported
ORF Names:AR1_179Imported
OrganismiEscherichia phage AR1 (Bacteriophage AR1)
Taxonomic identifieri66711 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageCaudoviralesMyoviridaeTevenvirinaeT4virus
Virus hostiEscherichia coli O157:H7 [TaxID: 83334]
Proteomesi
  • UP000007649 Componenti: Genome

Subcellular locationi

Capsid vertex protein gp24 :
  • Virion By similarity
Capsid vertex protein gp24* :
  • Virion By similarity

GO - Cellular componenti

Keywords - Cellular componenti

Capsid protein, T=13 icosahedral capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004323421 – 427Capsid vertex protein gp24Add BLAST427
ChainiPRO_000043234311 – 427Capsid vertex protein gp24*By similarityAdd BLAST417

Post-translational modificationi

Proteolytic cleavage give rise to gp24*.By similarity

Expressioni

Keywords - Developmental stagei

Late protein

Interactioni

Subunit structurei

Homopentamer. A total of 55 subunits of gp24 forms the 11 pentamers. Interacts with portal protein gp20. Interacts with gp23 that forms 160 hexamers.By similarity

Structurei

3D structure databases

SMRiD4Z9X5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the T4 phage capsid protein family.Curated

Phylogenomic databases

OrthoDBiVOG0900009S.

Family and domain databases

InterProiView protein in InterPro
IPR010762. Gp23/Gp24_T4-like.
PfamiView protein in Pfam
PF07068. Gp23. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

D4Z9X5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKINELLRE STTTNSNSIG RPNLVALTRA TTKLIYSDIV ATQRTNQPVA
60 70 80 90 100
AFYGIKYLNP DNEFTFKTGA TYAGEAGYVD REQITELTEE SKLTLNKGDL
110 120 130 140 150
FKYNNIVYKV LEDTPFADIE ESDLELALQI AIVLLKVRLF SDAASTSKFE
160 170 180 190 200
SSDSEIADAR FQINKWQTAV KSRKLKTGIT VELAQDLEAN GFDAPNFLED
210 220 230 240 250
LLATEMADEI NKDILQSLIT VSKRYKVTGI TDTGFIDLSY ASAPEAGRSL
260 270 280 290 300
YRMVCEMVSH IQKESTYTAT FCVASARAAA ILAASGWLKH KPEDDKYLSQ
310 320 330 340 350
NAYGFLANGL PLYCDTNSPL DYVIVGVVEN IGEKEIVGSI FYAPYTEGLD
360 370 380 390 400
LDDPEHVGAF KVVVDPESLQ PSIGLLVRYA LSANPYTVAK DEKEARVIDG
410 420
GDMDKMAGRS DLSVLLGVKL PKIIIDE
Length:427
Mass (Da):47,007
Last modified:June 15, 2010 - v1
Checksum:i26CFB315C9E91C5D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP011113 Genomic DNA. Translation: BAI83187.1.
RefSeqiYP_009167990.1. NC_027983.1.

Genome annotation databases

GeneIDi26041919.
KEGGivg:26041919.

Similar proteinsi

Entry informationi

Entry nameiCAPSP_BPAR1
AccessioniPrimary (citable) accession number: D4Z9X5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 4, 2015
Last sequence update: June 15, 2010
Last modified: April 12, 2017
This is version 23 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families