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D4Z6G0 (D4Z6G0_SPHJU) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Phosphoenolpyruvate carboxylase HAMAP-Rule MF_00595

Short name=PEPC HAMAP-Rule MF_00595
Short name=PEPCase HAMAP-Rule MF_00595
EC=4.1.1.31 HAMAP-Rule MF_00595
Gene names
Name:ppc HAMAP-Rule MF_00595 EMBL BAI98192.1
Ordered Locus Names:SJA_C1-33580 EMBL BAI98192.1
OrganismSphingobium japonicum (strain NBRC 101211 / UT26S) [Complete proteome] [HAMAP] EMBL BAI98192.1
Taxonomic identifier452662 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingobium

Protein attributes

Sequence length905 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. HAMAP-Rule MF_00595 SAAS SAAS022805

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. HAMAP-Rule MF_00595 SAAS SAAS021135

Cofactor

Magnesium By similarity. HAMAP-Rule MF_00595 SAAS SAAS021135

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00595

Sequence similarities

Belongs to the PEPCase type 1 family. HAMAP-Rule MF_00595

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1431 By similarity HAMAP-Rule MF_00595
Active site5721 By similarity HAMAP-Rule MF_00595

Sequences

Sequence LengthMass (Da)Tools
D4Z6G0 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: 40AC1366128B90F8

FASTA90598,312
        10         20         30         40         50         60 
MQHRSIMATL ASSSVPAITQ NPDIRYLGRL LGDVIRAYGG EKIYKQTEYI RSASVDRARG 

        70         80         90        100        110        120 
LHGADVVDTG LDALNLDDTL SFVRGFMLFS MLANLAEDRQ GVAAEPGADV ASAVEKLQSH 

       130        140        150        160        170        180 
GIGRQAVLDL LSHALIVPVL TAHPTEVRRK SMIDHKNRIA DLMLLKDGGR TETDEGENLD 

       190        200        210        220        230        240 
EAIFRQIALL WQTRPLRREK LFVADEIENV LAYFRDVFLP VLPALYARWE RVLGARPQSF 

       250        260        270        280        290        300 
LRVGNWIGGD RDGNPFVQAP QLRLALAKGC EAALGFYMDA LHALGAELSL STELAHVPQA 

       310        320        330        340        350        360 
VLDLADASGD VSPSRQDEPY RRAISGIYAR LAATHRSLVG KAAPRPSALK GEPYASPADL 

       370        380        390        400        410        420 
RRDLVTVAQG LASEGNGALA TGGALGRLIR AVETFGFHLA TLDMRQNSDV HQDVVAELLK 

       430        440        450        460        470        480 
VAGVEADYAG LDEYARIALL RRELANNRPL GTPFFEYSER TASELAIVHA AAEAHRIYGP 

       490        500        510        520        530        540 
QCITHYIISK AESVSDLLEV NIILKEAGLW RAGADGAPPQ AAIMAVPLFE TIADLEAAPK 

       550        560        570        580        590        600 
IMAAYFGLPE VGGVVRERGH QEVMIGYSDS NKDGGYITST WGLFQASKAL APVFAEAGTA 

       610        620        630        640        650        660 
MQLFHGRGGA VGRGGGSSFA AIQAQPKGTV QGRIRITEQG EVIAAKFGTR DVAMTNLEAT 

       670        680        690        700        710        720 
TSATLLASLE PEVLSDRDAA RFAAAMDQLS KTAFAAYRDL VYGTDGFKEF FRQLTPIQEI 

       730        740        750        760        770        780 
SGLKIGSRPA SRTKSTRIED LRAIPWVFSW AQARVMLPGW YGVGHALSAF EDKALLADMA 

       790        800        810        820        830        840 
QHWSFLQSAL ANLEMVLAKS DLGIAAHYLP LVEDQARGAE IFDRIRGGWD MTHDGLLAAT 

       850        860        870        880        890        900 
GQSRLLERNP KLDTSIRLRL PYIEPLNLLQ VELMKRHRSG EDDPRIKEGI ELSINAIATA 


LRNSG 

« Hide

References

[1]"Complete genome sequence of the representative gamma-hexachlorocyclohexane-degrading bacterium Sphingobium japonicum UT26."
Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A., Fukui S., Fujita N., Tsuda M.
J. Bacteriol. 192:5852-5853(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NBRC 101211 / UT26S.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP010803 Genomic DNA. Translation: BAI98192.1.
RefSeqYP_003546804.1. NC_014006.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAI98192; BAI98192; SJA_C1-33580.
GeneID8956626.
KEGGsjp:SJA_C1-33580.
PATRIC35438764. VBISphJap147895_3152.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000238647.
KOK01595.

Enzyme and pathway databases

BioCycSJAP452662:GHEL-3413-MONOMER.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD4Z6G0_SPHJU
AccessionPrimary (citable) accession number: D4Z6G0
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: February 19, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)