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D4Z6G0

- D4Z6G0_SPHJU

UniProt

D4Z6G0 - D4Z6G0_SPHJU

Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Sphingobium japonicum (strain NBRC 101211 / UT26S)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 29 (01 Oct 2014)
      Sequence version 1 (15 Jun 2010)
      Previous versions | rss
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    Functioni

    Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

    Catalytic activityi

    Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

    Cofactori

    Magnesium.UniRule annotationSAAS annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei143 – 1431UniRule annotation
    Active sitei572 – 5721UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-HAMAP
    2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
    3. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbon dioxide fixationUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, PyruvateImported

    Enzyme and pathway databases

    BioCyciSJAP452662:GHEL-3413-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
    Short name:
    PEPCUniRule annotation
    Short name:
    PEPCaseUniRule annotation
    Gene namesi
    Name:ppcUniRule annotationImported
    Ordered Locus Names:SJA_C1-33580Imported
    OrganismiSphingobium japonicum (strain NBRC 101211 / UT26S)Imported
    Taxonomic identifieri452662 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingobium
    ProteomesiUP000007753: Chromosome 1

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PEPCase type 1 family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000238647.
    KOiK01595.

    Family and domain databases

    HAMAPiMF_00595. PEPcase_type1.
    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 1 hit.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 1 hit.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D4Z6G0-1 [UniParc]FASTAAdd to Basket

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    MQHRSIMATL ASSSVPAITQ NPDIRYLGRL LGDVIRAYGG EKIYKQTEYI    50
    RSASVDRARG LHGADVVDTG LDALNLDDTL SFVRGFMLFS MLANLAEDRQ 100
    GVAAEPGADV ASAVEKLQSH GIGRQAVLDL LSHALIVPVL TAHPTEVRRK 150
    SMIDHKNRIA DLMLLKDGGR TETDEGENLD EAIFRQIALL WQTRPLRREK 200
    LFVADEIENV LAYFRDVFLP VLPALYARWE RVLGARPQSF LRVGNWIGGD 250
    RDGNPFVQAP QLRLALAKGC EAALGFYMDA LHALGAELSL STELAHVPQA 300
    VLDLADASGD VSPSRQDEPY RRAISGIYAR LAATHRSLVG KAAPRPSALK 350
    GEPYASPADL RRDLVTVAQG LASEGNGALA TGGALGRLIR AVETFGFHLA 400
    TLDMRQNSDV HQDVVAELLK VAGVEADYAG LDEYARIALL RRELANNRPL 450
    GTPFFEYSER TASELAIVHA AAEAHRIYGP QCITHYIISK AESVSDLLEV 500
    NIILKEAGLW RAGADGAPPQ AAIMAVPLFE TIADLEAAPK IMAAYFGLPE 550
    VGGVVRERGH QEVMIGYSDS NKDGGYITST WGLFQASKAL APVFAEAGTA 600
    MQLFHGRGGA VGRGGGSSFA AIQAQPKGTV QGRIRITEQG EVIAAKFGTR 650
    DVAMTNLEAT TSATLLASLE PEVLSDRDAA RFAAAMDQLS KTAFAAYRDL 700
    VYGTDGFKEF FRQLTPIQEI SGLKIGSRPA SRTKSTRIED LRAIPWVFSW 750
    AQARVMLPGW YGVGHALSAF EDKALLADMA QHWSFLQSAL ANLEMVLAKS 800
    DLGIAAHYLP LVEDQARGAE IFDRIRGGWD MTHDGLLAAT GQSRLLERNP 850
    KLDTSIRLRL PYIEPLNLLQ VELMKRHRSG EDDPRIKEGI ELSINAIATA 900
    LRNSG 905
    Length:905
    Mass (Da):98,312
    Last modified:June 15, 2010 - v1
    Checksum:i40AC1366128B90F8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP010803 Genomic DNA. Translation: BAI98192.1.
    RefSeqiWP_013041418.1. NC_014006.1.
    YP_003546804.1. NC_014006.1.

    Genome annotation databases

    EnsemblBacteriaiBAI98192; BAI98192; SJA_C1-33580.
    GeneIDi8956626.
    KEGGisjp:SJA_C1-33580.
    PATRICi35438764. VBISphJap147895_3152.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP010803 Genomic DNA. Translation: BAI98192.1 .
    RefSeqi WP_013041418.1. NC_014006.1.
    YP_003546804.1. NC_014006.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAI98192 ; BAI98192 ; SJA_C1-33580 .
    GeneIDi 8956626.
    KEGGi sjp:SJA_C1-33580.
    PATRICi 35438764. VBISphJap147895_3152.

    Phylogenomic databases

    HOGENOMi HOG000238647.
    KOi K01595.

    Enzyme and pathway databases

    BioCyci SJAP452662:GHEL-3413-MONOMER.

    Family and domain databases

    HAMAPi MF_00595. PEPcase_type1.
    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 1 hit.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 1 hit.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the representative gamma-hexachlorocyclohexane-degrading bacterium Sphingobium japonicum UT26."
      Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A., Fukui S., Fujita N., Tsuda M.
      J. Bacteriol. 192:5852-5853(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NBRC 101211 / UT26SImported.

    Entry informationi

    Entry nameiD4Z6G0_SPHJU
    AccessioniPrimary (citable) accession number: D4Z6G0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 15, 2010
    Last sequence update: June 15, 2010
    Last modified: October 1, 2014
    This is version 29 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3