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D4Z3E8

- D4Z3E8_SPHJU

UniProt

D4Z3E8 - D4Z3E8_SPHJU

Protein

2,3-bisphosphoglycerate-dependent phosphoglycerate mutase

Gene

gpm

Organism
Sphingobium japonicum (strain NBRC 101211 / UT26S)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 28 (01 Oct 2014)
      Sequence version 1 (15 Jun 2010)
      Previous versions | rss
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    Functioni

    Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.UniRule annotation

    Catalytic activityi

    2-phospho-D-glycerate = 3-phospho-D-glycerate.UniRule annotationSAAS annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei9 – 91Tele-phosphohistidine intermediateUniRule annotation
    Binding sitei15 – 1512-phospho-D-glycerateUniRule annotation
    Binding sitei60 – 6012-phospho-D-glycerateUniRule annotation
    Binding sitei98 – 9812-phospho-D-glycerateUniRule annotation
    Active sitei179 – 1791UniRule annotation
    Binding sitei181 – 18112-phospho-D-glycerateUniRule annotation

    GO - Molecular functioni

    1. 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. glycolytic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    GlycolysisUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciSJAP452662:GHEL-2339-MONOMER.
    UniPathwayiUPA00109; UER00186.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    2,3-bisphosphoglycerate-dependent phosphoglycerate mutaseUniRule annotation (EC:5.4.2.11UniRule annotation)
    Short name:
    BPG-dependent PGAMUniRule annotation
    Short name:
    PGAMUniRule annotation
    Short name:
    PhosphoglyceromutaseUniRule annotation
    Short name:
    dPGMUniRule annotation
    Gene namesi
    Name:gpmImported
    Synonyms:gpmAUniRule annotation
    Ordered Locus Names:SJA_C1-22960Imported
    OrganismiSphingobium japonicum (strain NBRC 101211 / UT26S)Imported
    Taxonomic identifieri452662 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingobium
    ProteomesiUP000007753: Chromosome 1

    Structurei

    3D structure databases

    ProteinModelPortaliD4Z3E8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni21 – 2222-phospho-D-glycerate bindingUniRule annotation
    Regioni87 – 9042-phospho-D-glycerate bindingUniRule annotation
    Regioni114 – 11522-phospho-D-glycerate bindingUniRule annotation

    Sequence similaritiesi

    Belongs to the phosphoglycerate mutase family. BPG-dependent PGAM subfamily.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000221682.
    KOiK01834.

    Family and domain databases

    Gene3Di3.40.50.1240. 1 hit.
    HAMAPiMF_01039. PGAM_GpmA.
    InterProiIPR013078. His_Pase_superF_clade-1.
    IPR029033. His_PPase_superfam.
    IPR001345. PG/BPGM_mutase_AS.
    IPR005952. Phosphogly_mut1.
    [Graphical view]
    PANTHERiPTHR11931. PTHR11931. 1 hit.
    PfamiPF00300. His_Phos_1. 1 hit.
    [Graphical view]
    SMARTiSM00855. PGAM. 1 hit.
    [Graphical view]
    SUPFAMiSSF53254. SSF53254. 1 hit.
    TIGRFAMsiTIGR01258. pgm_1. 1 hit.
    PROSITEiPS00175. PG_MUTASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D4Z3E8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPTLVLIRHG QSAWNLENRF TGWWDVDVTE KGAEEARAAG RLLREKGLDF    50
    DQCYTSVQTR AIKTLNLVLE EMGRLWLPVE KDWRLNERHY GGLTGLNKAE 100
    TAAKHGDDQV KIWRRSFDTP PPPLEPGSEF DLSKDRRYAG IPIPSTESLK 150
    DTIARVLPYW EERIAPDLKA GKRVVISAHG NSLRALVKHL SNIPDDEITE 200
    LEIPTGQPIV YDLADDLTAK DRYYLSER 228
    Length:228
    Mass (Da):25,988
    Last modified:June 15, 2010 - v1
    Checksum:iB965B063266F8A34
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP010803 Genomic DNA. Translation: BAI97130.1.
    RefSeqiYP_003545742.1. NC_014006.1.

    Genome annotation databases

    EnsemblBacteriaiBAI97130; BAI97130; SJA_C1-22960.
    GeneIDi8956494.
    KEGGisjp:SJA_C1-22960.
    PATRICi35436768. VBISphJap147895_2165.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP010803 Genomic DNA. Translation: BAI97130.1 .
    RefSeqi YP_003545742.1. NC_014006.1.

    3D structure databases

    ProteinModelPortali D4Z3E8.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAI97130 ; BAI97130 ; SJA_C1-22960 .
    GeneIDi 8956494.
    KEGGi sjp:SJA_C1-22960.
    PATRICi 35436768. VBISphJap147895_2165.

    Phylogenomic databases

    HOGENOMi HOG000221682.
    KOi K01834.

    Enzyme and pathway databases

    UniPathwayi UPA00109 ; UER00186 .
    BioCyci SJAP452662:GHEL-2339-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.1240. 1 hit.
    HAMAPi MF_01039. PGAM_GpmA.
    InterProi IPR013078. His_Pase_superF_clade-1.
    IPR029033. His_PPase_superfam.
    IPR001345. PG/BPGM_mutase_AS.
    IPR005952. Phosphogly_mut1.
    [Graphical view ]
    PANTHERi PTHR11931. PTHR11931. 1 hit.
    Pfami PF00300. His_Phos_1. 1 hit.
    [Graphical view ]
    SMARTi SM00855. PGAM. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53254. SSF53254. 1 hit.
    TIGRFAMsi TIGR01258. pgm_1. 1 hit.
    PROSITEi PS00175. PG_MUTASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the representative gamma-hexachlorocyclohexane-degrading bacterium Sphingobium japonicum UT26."
      Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A., Fukui S., Fujita N., Tsuda M.
      J. Bacteriol. 192:5852-5853(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NBRC 101211 / UT26SImported.

    Entry informationi

    Entry nameiD4Z3E8_SPHJU
    AccessioniPrimary (citable) accession number: D4Z3E8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 15, 2010
    Last sequence update: June 15, 2010
    Last modified: October 1, 2014
    This is version 28 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3