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D4Z278 (D4Z278_SPHJU) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.2.1.3 EMBL BAI96710.1
Gene names
Ordered Locus Names:SJA_C1-18760 EMBL BAI96710.1
OrganismSphingobium japonicum (strain NBRC 101211 / UT26S) [Complete proteome] [HAMAP] EMBL BAI96710.1
Taxonomic identifier452662 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingobium

Protein attributes

Sequence length404 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionOxidoreductase EMBL BAI96710.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionaldehyde dehydrogenase (NAD) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D4Z278 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: D4F994E3933A178E

FASTA40442,391
        10         20         30         40         50         60 
MAMIGKGLRD SLPHPRGTGS RKENQMHFLR FFISGSWIDN SGADTLPLID PSTRQPCATI 

        70         80         90        100        110        120 
PLGTPADVDM AVAAAQAAFP AYASSTAAER AALLAAILSV YEKREEDLAQ AICTEIGAPY 

       130        140        150        160        170        180 
MLSRYAHVFA GAAHLKLMID ALGSFPFEEA RGSATIHREP IGVVGMITPW NWPINQVAAK 

       190        200        210        220        230        240 
VVPALAAGCT MVLKPSELAP LSAHILAEIF EEAGVPPGVF NLIHGKGDPV GAALAAHPGI 

       250        260        270        280        290        300 
DMISFTGSTR AGVLVAQAAA PTVKRVAQEL GGKSANIILD DADFEVAVSS GVAAMMLNSG 

       310        320        330        340        350        360 
QSCNAPSRML VPAARRADLD AIVERAALLQ RLAAVRGRLS LCADQAAAAK WWLSMPMASV 

       370        380        390        400 
SAEGPMPKAL STRRTSPLMP GCRHQGRACP LRRARMTSNP LIVA 

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References

[1]"Complete genome sequence of the representative gamma-hexachlorocyclohexane-degrading bacterium Sphingobium japonicum UT26."
Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A., Fukui S., Fujita N., Tsuda M.
J. Bacteriol. 192:5852-5853(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NBRC 101211 / UT26S.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP010803 Genomic DNA. Translation: BAI96710.1.
RefSeqYP_003545322.1. NC_014006.1.

3D structure databases

ProteinModelPortalD4Z278.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAI96710; BAI96710; SJA_C1-18760.
GeneID8956727.
KEGGsjp:SJA_C1-18760.
PATRIC35435958. VBISphJap147895_1772.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000271505.
KOK00128.

Enzyme and pathway databases

BioCycSJAP452662:GHEL-1907-MONOMER.

Family and domain databases

Gene3D3.40.605.10. 1 hit.
InterProIPR016161. Ald_DH/histidinol_DH.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
[Graphical view]
PfamPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMSSF53720. SSF53720. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD4Z278_SPHJU
AccessionPrimary (citable) accession number: D4Z278
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: December 11, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)