D4LDC6 (D4LDC6_RUMC1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Beta-mannanase EMBL CBL17621.1

Gene names

Ordered Locus Names:

RUM_15270 EMBL CBL17621.1

Organism

Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) [Complete proteome] [HAMAP] EMBL CBL17621.1

Taxonomic identifier

213810 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Ruminococcaceae › Ruminococcus › Ruminococcus champanellensis

Protein attributes

Sequence length	716 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	polysaccharide catabolic process Inferred from electronic annotation. Source: InterPro substituted mannan metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	carbohydrate binding Inferred from electronic annotation. Source: InterPro cellulase activity Inferred from electronic annotation. Source: InterPro mannan endo-1,4-beta-mannosidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D4LDC6 [UniParc]. Last modified May 18, 2010. Version 1. Checksum: 054F48F7F6A776B2	FASTA	716	79,544
	10 20 30 40 50 60 MNSFVKRLGS ALTASAMMLT AGIFVPVQAA DTGADAAPLF TAEAEDCTLL TGASVTTNVY 70 80 90 100 110 120 GTEYPGYSGD GFVWAGNAGG MTFEVDVPEN AMYELTTRCW MYLGDPGTTR MQTLAIDGDV 130 140 150 160 170 180 KSSIYIANNE KWEDSSFGFF YLEKGKHTIE VGATGSWGFI LYDTVTFDFA DMPELNIAPD 190 200 210 220 230 240 PCDKNATAET KALMKYMTGQ YGNHIISGQQ EIYGGGNNGD TELEFRYIYE TTGKYPVIRG 250 260 270 280 290 300 FDFMNYNPLY GWEDGTTGRV INWVANCGGI ATASWHINVP QDFDSYTLGD QLDWQKCTYK 310 320 330 340 350 360 PTSSFNTANC LDPTTKEYKY LMLAIEDLAE QLLILQDANV PIIFRPFHEA EGNNNTNGSG 370 380 390 400 410 420 AWFWWGSSGA EVYKELWKLL YTTLTEEYGI HNCIWEVNLY DYANSAQWYP GNDYVDMVAY 430 440 450 460 470 480 DKYEGSPYTW NTSAATSVFL TLVNDTNDTK MVALAENDVI PDITNMVNEG AWWSYFCPWY 490 500 510 520 530 540 GDFITNGTTN TKEMLDKIYN SDYVVTLDEV PNDLYGYARG NGGNWNVEGA YECEDGNIQT 550 560 570 580 590 600 NKGTTTVAYD YCSGGKYVYL QGEGDYIEQT VTVEKAGKYA IRYGYQQNFE KNGKTQNLYV 610 620 630 640 650 660 NGTAVGEAFF PYSILFGESD AIVVELKAGK NTIKVESGEG WTYFDYLTVS YVGDDILTGD 670 680 690 700 710 INLDGKLSVS DVVLLQKYLI KSGKLTADQA KRADLNGDGV LNAYDLALLK HTMLGK

References

[1]	"The genome sequence of Ruminococcus sp. 18P13." Pajon A., Turner K., Parkhill J., Bernalier A. Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 18848 / JCM 17042 / 18P13.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FP929052 Genomic DNA. Translation: CBL17621.1.
3D structure databases
ProteinModelPortal	D4LDC6.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CBL17621; CBL17621; RUM_15270.
PATRIC	43169357. VBIRumSp55702_1425.
Organism-specific databases
CMR	Search...
Family and domain databases
Gene3D	1.10.1330.10. 1 hit. 3.20.20.80. 1 hit.
InterPro	IPR016134. Cellulos_enz_dockerin_1. IPR005084. CMB_fam6. IPR018247. EF_Hand_1_Ca_BS. IPR022790. EndoGluc_H/Glyco_hydro_26. IPR008979. Galactose-bd-like. IPR000805. Glyco_hydro_26. IPR013781. Glyco_hydro_catalytic_dom. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Pfam	PF02156. Glyco_hydro_26. 1 hit. [Graphical view]
PRINTS	PR00739. GLHYDRLASE26.
SUPFAM	SSF63446. Cellulos_enz_dockerin_1. 1 hit. SSF49785. Gal_bind_like. 2 hits. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS51175. CBM6. 2 hits. PS00018. EF_HAND_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D4LDC6_RUMC1

Accession

Primary (citable) accession number: D4LDC6

Entry history

Integrated into UniProtKB/TrEMBL:	May 18, 2010
Last sequence update:	May 18, 2010
Last modified:	May 1, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)