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D4L985

- D4L985_9FIRM

UniProt

D4L985 - D4L985_9FIRM

Protein

Alpha-amylase

Gene

RBR_20490

Organism
Ruminococcus bromii L2-63
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 21 (01 Oct 2014)
      Sequence version 1 (18 May 2010)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. polysaccharide catabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseUniRule annotationImported, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciRBRO657321-WGS:GSU1-1737-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    ORF Names:RBR_20490Imported
    OrganismiRuminococcus bromii L2-63Imported
    Taxonomic identifieri657321 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesRuminococcaceaeRuminococcus
    ProteomesiUP000008954: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD4L985.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di1.10.1330.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR006046. Alpha_amylase.
    IPR016134. Cellulos_enz_dockerin_1.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF63446. SSF63446. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D4L985-1 [UniParc]FASTAAdd to Basket

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    MKKAKKIASL VVASALLTSS FAAITSVNAA EVDSAQTASA DSTLRDKVGD     50
    GVMLHAFNWS YNTIKENLPA IAAAGYTTVQ TSPVQQPKDY STSGDVTGQW 100
    WKLYQPISFH IAEESWLGTK DDLKSLCDEA DKYGIKIICD IVSNHIANAD 150
    EARPDTVSNQ VKKYEPEFYK KRKTYTRTYK GDANDSSVQA VVQGHVSKCP 200
    DLVTNDTAVQ GYIINLLKEC IDCGVDGFRF DAAKHIETED DGEYASDYWK 250
    NITTSASSYY TQKTGDDLYI YGEILNNCGA DRSYSSYTKY INVTDNRTGD 300
    AVLYNVTRGK ASTATNAKYK SGVAASNAVL WAESHDTYEG SSGSSGFSNT 350
    AGISDENVVK AWAIVASRKD STALFFARPG TALMGNISTD STYKSTAVSE 400
    INKFHNLFVG QSEKLGSSGD IAYVARGTSG IVLSNCKGTN ASVSISGTGL 450
    ADGKYTDTVS GAEFTVANGV LTGSIGDTGV AVVYNGTTTP KAINSVESGS 500
    FRGDTMTLTL SLENATSGTY CLDDSTPVKF TGTTSIRIGS DYKPGETINL 550
    TVTATDGVKT SSMVYKYAKS TAQESGVYVF FNPANKKGWS APYQVYIFDE 600
    TTNKGTVYKN ANWPGEAMTL DPATGYYYYE VPKSSSISAD EDDENQAASD 650
    FDLSTSANTR VIISEKGGEQ YPGRTGTPIS LNGSSKAFSL TKAGTWEDTT 700
    LTPTKVEIEA TDVTKGSAAE PTTKPVPPTQ PTTAQPATEP SGNAVYGDVN 750
    GDGDITVVDA TLVQKHVVQL ETLSADKQIL ADVNGDNTIS VVDATLIQKY 800
    IVQLKDWGRT GDVYQAEQPT TPEPTTAEPT TVKPTAQPTT KPADTYTLYF 850
    KTKLGWMTSD GVSLFAYDLD TGASYQFEQD TDAYPNVYTV EVPATVSNVS 900
    VYRSLSEVDE KPVGGDDGNV YNCWDATVSK TNNCITLSND EAVSTAPYVP 950
    EQKPAFTLSR VYFDNSKAHY TDVYIYGWAE SGLGNAAAHM NKIAGTDIWY 1000
    YDFDTPLSPG SNCFLFKDTE STWKTQTSDL TVADGKNCFR ANPGSKSGGV 1050
    WVSYSE 1056
    Length:1,056
    Mass (Da):113,492
    Last modified:May 18, 2010 - v1
    Checksum:i364AB77C15E09864
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FP929051 Genomic DNA. Translation: CBL16180.1.
    RefSeqiWP_015524223.1. NC_021013.1.
    YP_007781957.1. NC_021013.1.

    Genome annotation databases

    EnsemblBacteriaiCBL16180; CBL16180; RBR_20490.
    GeneIDi15184239.
    KEGGirbr:RBR_20490.
    PATRICi43158877. VBIRumBro49525_1010.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FP929051 Genomic DNA. Translation: CBL16180.1 .
    RefSeqi WP_015524223.1. NC_021013.1.
    YP_007781957.1. NC_021013.1.

    3D structure databases

    ProteinModelPortali D4L985.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBL16180 ; CBL16180 ; RBR_20490 .
    GeneIDi 15184239.
    KEGGi rbr:RBR_20490.
    PATRICi 43158877. VBIRumBro49525_1010.

    Phylogenomic databases

    KOi K01176.

    Enzyme and pathway databases

    BioCyci RBRO657321-WGS:GSU1-1737-MONOMER.

    Family and domain databases

    Gene3Di 1.10.1330.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR006046. Alpha_amylase.
    IPR016134. Cellulos_enz_dockerin_1.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF63446. SSF63446. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of Ruminococcus bromii L2-63."
      metaHIT consortium -- http://www.metahit.eu/
      Pajon A., Turner K., Parkhill J., Duncan S., Flint H.
      Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: L2-63Imported.

    Entry informationi

    Entry nameiD4L985_9FIRM
    AccessioniPrimary (citable) accession number: D4L985
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 18, 2010
    Last sequence update: May 18, 2010
    Last modified: October 1, 2014
    This is version 21 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3