Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Draft genome

Gene

EC1_16740

Organism
Faecalitalea cylindroides T2-87
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei231 – 2311NucleophileUniRule annotation
Active sitei261 – 2611Proton donorUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Names & Taxonomyi

Protein namesi
Submitted name:
Draft genomeImported (EC:3.2.1.1Imported)
Gene namesi
ORF Names:EC1_16740Imported
OrganismiFaecalitalea cylindroides T2-87Imported
Taxonomic identifieri717960 [NCBI]
Taxonomic lineageiBacteriaFirmicutesErysipelotrichiaErysipelotrichalesErysipelotrichaceaeFaecalitalea
ProteomesiUP000008801 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi717960.EC1_16740.

Structurei

3D structure databases

ProteinModelPortaliD4JFK5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

D4JFK5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKRTMIQYF EWYLKSDPPL YQTLMKEASS LSKMGFTHVW LPPAYKGQAG
60 70 80 90 100
INDVGYGVYD MYDLGEFDQK GSIRTKYGTK DEYIQAIDVC HQNSLQVIAD
110 120 130 140 150
IVFNHRMGAD EKETIKATAM DWNDRNRAVG QEKIVDVWTK YTFPVRNGKY
160 170 180 190 200
SKFQWTWKDF DGTDYDAKTN QNVLMTFENK KWDPKVSKEE GNFDFIMGDD
210 220 230 240 250
LDFQNPNVIE ELYHWGKWYK EFTNIDGYRL DAIKSIDSNF FKGWLDKQKS
260 270 280 290 300
YHTNDVYAVG EYWSGDLNEL NTYLNDSGHC MHLFDVPLHF NLFNASSSYD
310 320 330 340 350
TYDMSRILDH TLVSSQNEYA CPFVDNHDTQ PGQALYSWVQ GWFKLHAYSL
360 370 380 390 400
ILLRNFDNPC VFYGDLYGIE HDNIGPVTHL SELVWIRSRI LEDEIEDRFD
410 420 430 440 450
DFHCIGWKVD GKHPIVVVMT NGLANGKEFV IKNKSNIEFI DLVTKKTIKL
460 470 480
DENGRGKFDC FDGGCSIFIE SEVYQKMKEE LEL
Length:483
Mass (Da):56,411
Last modified:May 18, 2010 - v1
Checksum:i7472D3A4172FA6CD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FP929041 Genomic DNA. Translation: CBK88977.1.
RefSeqiWP_015536193.1. NC_021019.1.
YP_007798583.1. NC_021019.1.

Genome annotation databases

EnsemblBacteriaiCBK88977; CBK88977; EC1_16740.
KEGGieuc:EC1_16740.
PATRICi42980032. VBIEubCyl154092_1162.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FP929041 Genomic DNA. Translation: CBK88977.1.
RefSeqiWP_015536193.1. NC_021019.1.
YP_007798583.1. NC_021019.1.

3D structure databases

ProteinModelPortaliD4JFK5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi717960.EC1_16740.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCBK88977; CBK88977; EC1_16740.
KEGGieuc:EC1_16740.
PATRICi42980032. VBIEubCyl154092_1162.

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Eubacterium cylindroides T2-87."
    metaHIT consortium -- http://www.metahit.eu/
    Pajon A., Turner K., Parkhill J., Duncan S., Flint H.
    Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: T2-87Imported.
  2. Pajon A.
    Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: T2-87Imported.

Entry informationi

Entry nameiD4JFK5_9FIRM
AccessioniPrimary (citable) accession number: D4JFK5
Entry historyi
Integrated into UniProtKB/TrEMBL: May 18, 2010
Last sequence update: May 18, 2010
Last modified: June 24, 2015
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.