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D4JFK5 (D4JFK5_9FIRM) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length483 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL CBK88977.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

calcium ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D4JFK5 [UniParc].

Last modified May 18, 2010. Version 1.
Checksum: 7472D3A4172FA6CD

FASTA48356,411
        10         20         30         40         50         60 
MTKRTMIQYF EWYLKSDPPL YQTLMKEASS LSKMGFTHVW LPPAYKGQAG INDVGYGVYD 

        70         80         90        100        110        120 
MYDLGEFDQK GSIRTKYGTK DEYIQAIDVC HQNSLQVIAD IVFNHRMGAD EKETIKATAM 

       130        140        150        160        170        180 
DWNDRNRAVG QEKIVDVWTK YTFPVRNGKY SKFQWTWKDF DGTDYDAKTN QNVLMTFENK 

       190        200        210        220        230        240 
KWDPKVSKEE GNFDFIMGDD LDFQNPNVIE ELYHWGKWYK EFTNIDGYRL DAIKSIDSNF 

       250        260        270        280        290        300 
FKGWLDKQKS YHTNDVYAVG EYWSGDLNEL NTYLNDSGHC MHLFDVPLHF NLFNASSSYD 

       310        320        330        340        350        360 
TYDMSRILDH TLVSSQNEYA CPFVDNHDTQ PGQALYSWVQ GWFKLHAYSL ILLRNFDNPC 

       370        380        390        400        410        420 
VFYGDLYGIE HDNIGPVTHL SELVWIRSRI LEDEIEDRFD DFHCIGWKVD GKHPIVVVMT 

       430        440        450        460        470        480 
NGLANGKEFV IKNKSNIEFI DLVTKKTIKL DENGRGKFDC FDGGCSIFIE SEVYQKMKEE 


LEL 

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References

[1]"The genome sequence of Eubacterium cylindroides T2-87."
metaHIT consortium -- http://www.metahit.eu/
Pajon A., Turner K., Parkhill J., Duncan S., Flint H.
Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: T2-87 EMBL CBK88977.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FP929041 Genomic DNA. Translation: CBK88977.1.
RefSeqYP_007798583.1. NC_021019.1.

3D structure databases

ProteinModelPortalD4JFK5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBK88977; CBK88977; EC1_16740.
GeneID15198336.
KEGGeuc:EC1_16740.
PATRIC42980032. VBIEubCyl154092_1162.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD4JFK5_9FIRM
AccessionPrimary (citable) accession number: D4JFK5
Entry history
Integrated into UniProtKB/TrEMBL: May 18, 2010
Last sequence update: May 18, 2010
Last modified: January 22, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)