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D4IFW2

- D4IFW2_ERWAE

UniProt

D4IFW2 - D4IFW2_ERWAE

Protein

Deoxyribose-phosphate aldolase

Gene

deoC

Organism
Erwinia amylovora (strain ATCC 49946 / CCPPB 0273 / Ea273 / 27-3)
Status
Unreviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (18 May 2010)
      Previous versions | rss
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    Functioni

    Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.UniRule annotationSAAS annotation

    Catalytic activityi

    2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde.UniRule annotationSAAS annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei167 – 1671Schiff-base intermediate with acetaldehydeUniRule annotation
    Active sitei201 – 2011UniRule annotation

    GO - Molecular functioni

    1. deoxyribose-phosphate aldolase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbohydrate catabolic process Source: UniProtKB-HAMAP
    2. deoxyribonucleotide catabolic process Source: InterPro
    3. deoxyribose phosphate catabolic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    LyaseUniRule annotationSAAS annotationImported

    Keywords - Ligandi

    Schiff baseUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciEAMY716540:GJAV-652-MONOMER.
    UniPathwayiUPA00002; UER00468.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Deoxyribose-phosphate aldolaseUniRule annotation (EC:4.1.2.4UniRule annotation)
    Short name:
    DERAUniRule annotation
    Alternative name(s):
    2-deoxy-D-ribose 5-phosphate aldolaseUniRule annotation
    PhosphodeoxyriboaldolaseUniRule annotation
    Gene namesi
    Name:deoCUniRule annotationImported
    Ordered Locus Names:EAM_0615Imported
    OrganismiErwinia amylovora (strain ATCC 49946 / CCPPB 0273 / Ea273 / 27-3)Imported
    Taxonomic identifieri716540 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeErwinia
    ProteomesiUP000008873: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Structurei

    3D structure databases

    ProteinModelPortaliD4IFW2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the DeoC/FbaB aldolase family. DeoC type 2 subfamily.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000241644.
    KOiK01619.

    Family and domain databases

    Gene3Di3.20.20.70. 1 hit.
    HAMAPiMF_00592. DeoC_type2.
    InterProiIPR013785. Aldolase_TIM.
    IPR011343. DeoC.
    IPR002915. DeoC/FbaB/lacD_aldolase.
    IPR023649. DeoC_typeII.
    [Graphical view]
    PANTHERiPTHR10889. PTHR10889. 1 hit.
    PfamiPF01791. DeoC. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001357. DeoC. 1 hit.
    TIGRFAMsiTIGR00126. deoC. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D4IFW2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSDVKTQALR ALQLMDLTTL NDDDTDAKVL ALCRQAKSPA GNTAAICIYP    50
    RFIPLARKTL REQGTPEIRI ATVTNFPHGN DDIEIALAET RAAIAYGADE 100
    VDVVFPYRAL MAGNGTVGFE LVKACKQACS AANVLLKVII ESGELKEDAL 150
    IRQASEIAID AGADFIKTST GKVPVNATPA VAEIMMRTIA AKGVHQQVGF 200
    KPAGGVRTAE EAALYLQLAD DILGPDWADA RHFRFGASSL LASLLNAAGF 250
    NSAASDSSY 259
    Length:259
    Mass (Da):27,438
    Last modified:May 18, 2010 - v1
    Checksum:i0DB4E1AF395D6F96
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN666575 Genomic DNA. Translation: CBJ45290.1.
    RefSeqiYP_003537705.1. NC_013971.1.

    Genome annotation databases

    EnsemblBacteriaiCBJ45290; CBJ45290; EAM_0615.
    GeneIDi8949116.
    KEGGieay:EAM_0615.
    PATRICi35412647. VBIErwAmy154257_0592.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN666575 Genomic DNA. Translation: CBJ45290.1 .
    RefSeqi YP_003537705.1. NC_013971.1.

    3D structure databases

    ProteinModelPortali D4IFW2.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBJ45290 ; CBJ45290 ; EAM_0615 .
    GeneIDi 8949116.
    KEGGi eay:EAM_0615.
    PATRICi 35412647. VBIErwAmy154257_0592.

    Phylogenomic databases

    HOGENOMi HOG000241644.
    KOi K01619.

    Enzyme and pathway databases

    UniPathwayi UPA00002 ; UER00468 .
    BioCyci EAMY716540:GJAV-652-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.70. 1 hit.
    HAMAPi MF_00592. DeoC_type2.
    InterProi IPR013785. Aldolase_TIM.
    IPR011343. DeoC.
    IPR002915. DeoC/FbaB/lacD_aldolase.
    IPR023649. DeoC_typeII.
    [Graphical view ]
    PANTHERi PTHR10889. PTHR10889. 1 hit.
    Pfami PF01791. DeoC. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001357. DeoC. 1 hit.
    TIGRFAMsi TIGR00126. deoC. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 49946 / CCPPB 0273 / Ea273 / 27-3Imported.

    Entry informationi

    Entry nameiD4IFW2_ERWAE
    AccessioniPrimary (citable) accession number: D4IFW2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 18, 2010
    Last sequence update: May 18, 2010
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3