D4IAI1 (D4IAI1_ERWAE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribonuclease E EMBL CBJ46125.1

Gene names

Name:	rne EMBL CBJ46125.1
Ordered Locus Names:	EAM_1450 EMBL CBJ46125.1

Organism

Erwinia amylovora (strain ATCC 49946 / CCPPB 0273 / Ea273 / 27-3) [Complete proteome] [HAMAP] EMBL CBJ46125.1

Taxonomic identifier

716540 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Erwinia › Erwinia amylovora

Protein attributes

Sequence length	1179 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	RNA processing Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro ribonuclease activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D4IAI1 [UniParc]. Last modified May 18, 2010. Version 1. Checksum: 96EA4F2203D13817	FASTA	1,179	128,827
	10 20 30 40 50 60 MKRMLINATQ QEELRVALVD GQRLYDLDIE SPGHEQKKAN IYKGKITRIE PSLEAAFVDY 70 80 90 100 110 120 GAERHGFLPL KEISREYFPS HYNAHGRPNI KDVLREGQEV IVQIDKEERG NKGAALTTFI 130 140 150 160 170 180 SLAGSYLVLM PNNPRAGGIS RRIEGDDRTE LKEALSSLEL PDGMGLIVRT AGVGKSAEAL 190 200 210 220 230 240 QWDLGFRIKH WEAIKKAADS RPAPFLIHQE SNVIVRAFRD YLRQDIGEIL IDNPKVLELA 250 260 270 280 290 300 RQHIAALGRP DFSSKIKLYT GEIPLFSHYQ IESQIESAFQ REVRLPSGGS IVIDTTEALT 310 320 330 340 350 360 AIDINSARAT RGGDIEETAF NTNLEAADEI ARQLRLRDLG GLIVIDFIDM TPVRHQRAVE 370 380 390 400 410 420 NRLREAVRQD RARIQISHIS RFGLLEMSRQ RLSPSLGESS HHVCPRCSGT GTIRDNESLA 430 440 450 460 470 480 LSILRLIEEE ALKENTKEVH AIVPVQVASY LLNEKREAVS AIEKRQGGVR AIIVPNDNMQ 490 500 510 520 530 540 TPHYSVLRVR SGEETQTLSY HLPKLHEAEM ALPSEEEHAE RKSPEQPALA AFVMPDAPPA 550 560 570 580 590 600 PHEVAVVPAV TKAAVKTPAP ASPAQPGLVS RIVSGLKKLF AAPEKPAQQP PQPAVEEKSA 610 620 630 640 650 660 EASAPRGERR NNRRQNNRRD RNGDRNERND RNERNDRNDR SAERNERAPR ERSNENREGR 670 680 690 700 710 720 DDRRNNNRRN AQQTDARSER MVPDEFERSE TTPPRQPRQD RQRRRSGQNQ EEKRPLVQEE 730 740 750 760 770 780 KIPEPVVENV PAPEVEEQSV EVMPRRKQRQ LNQKVRIETA EQTAARSFAP DESEPAVPAV 790 800 810 820 830 840 GESVVETEDH DDRDGNNMPR RSRRSPRHLR VSGQRRRRYR DERYPTQSPM PLAHAAASPE 850 860 870 880 890 900 SASGKVWISY PVAQVSDHET HEEHPHSVVP AYGHADKAQP EAVDTAATVA MHASVTESIA 910 920 930 940 950 960 APAVEAAPAV ESAPAVKAAP AVEAAPAVEA APAVKAAPAV KAAPAVEAAP AVEAAPAVKA 970 980 990 1000 1010 1020 APAVEAAPAV KAAPAVESAS AMEQAEAVEI VEAASVHQPE ITPVAAEDSA AIDAPVNQQP 1030 1040 1050 1060 1070 1080 AVISAADEAV AAKTAAEAVP AEPVKPEPAE AVSVNAVDVS VQQAAATTRV APVEPGTEVK 1090 1100 1110 1120 1130 1140 QQVVAVQNSP EAAAEQHSAA EEPHAPLPAR DEPVDSAPLQ AGLYKHHATA PMTKAPAPAY 1150 1160 1170 QPEPERHSDW VRPAFNFEGK GAAGAHTASH LATAPATRP

References

[1]

"Complete genome sequence of the plant pathogen Erwinia amylovora strain ATCC 49946." Sebaihia M., Bocsanczy A.M., Biehl B.S., Quail M.A., Perna N.T., Glasner J.D., Declerck G.A., Cartinhour S., Schneider D.J., Bentley S.D., Parkhill J., Beer S.V. J. Bacteriol. 192:2020-2021(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49946 / CCPPB 0273 / Ea273 / 27-3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FN666575 Genomic DNA. Translation: CBJ46125.1.
RefSeq	YP_003538535.1. NC_013971.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CBJ46125; CBJ46125; EAM_1450.
GeneID	8951004.
KEGG	eay:EAM_1450.
PATRIC	35414363. VBIErwAmy154257_1426.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000258027.
KO	K08300.
Enzyme and pathway databases
BioCyc	EAMY716540:GJAV-1511-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012340. NA-bd_OB-fold. IPR021968. PNPase_C. IPR003029. Rbsml_prot_S1_RNA-bd_dom. IPR019307. RNA-bd_AU-1/RNase_E/G. IPR022967. RNA-binding_domain_S1. IPR004659. RNase_E/G. [Graphical view]
Pfam	PF12111. PNPase_C. 1 hit. PF10150. RNase_E_G. 1 hit. PF00575. S1. 1 hit. [Graphical view]
SMART	SM00316. S1. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR00757. RNaseEG. 1 hit.
PROSITE	PS50126. S1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D4IAI1_ERWAE

Accession

Primary (citable) accession number: D4IAI1

Entry history

Integrated into UniProtKB/TrEMBL:	May 18, 2010
Last sequence update:	May 18, 2010
Last modified:	May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)