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Protein

Endoglucanase

Gene

GH9A

Organism
Limnoria quadripunctata
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Cellulose degradationUniRule annotation, Polysaccharide degradation

Names & Taxonomyi

Protein namesi
Recommended name:
EndoglucanaseUniRule annotation (EC:3.2.1.4UniRule annotation)
Gene namesi
Name:GH9AImported
OrganismiLimnoria quadripunctataImported
Taxonomic identifieri161573 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaCrustaceaMalacostracaEumalacostracaPeracaridaIsopodaLimnoriidaeLimnoria

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1717UniRule annotationAdd
BLAST
Chaini18 – 457440EndoglucanaseUniRule annotationPRO_5001341185Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliD4HRL2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 9 (cellulase E) family.UniRule annotation

Keywords - Domaini

SignalUniRule annotation

Family and domain databases

Gene3Di1.50.10.10. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
IPR018221. Glyco_hydro_9_AS.
[Graphical view]
PfamiPF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 1 hit.
PROSITEiPS00698. GLYCOSYL_HYDROL_F9_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D4HRL2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKAALGILLL VLGTAYGQGN GGCSGTGMSP YDYSQALCMS PLFYEAQRSG
60 70 80 90 100
KLPADQRVTW RADSGLQDGA DVGLDLTGGY YDAGDYVKFN FPMAASVTAL
110 120 130 140 150
AFGLHAFPSG MSTAGQTNYV KAAVKWGSDY FLKCVQGPTT LWGQVGDPDV
160 170 180 190 200
DHAYWGRPED MTETRVSYKI DASAPGTDLA AETAAALAGA AVVHSGSYAS
210 220 230 240 250
ECVSAAEQMY TFADEHRGKY SNSIDKAANF YSSYSFHDEL PWAALWLYLA
260 270 280 290 300
TGENSYLSDA EGYIQEFGLL DADVLNVDWD DKTAGVYALM VEIDGGSQYT
310 320 330 340 350
SALQGYVDNL LSYQHTPGGM VYISDWGSLR EAVNAAFIAA RAASLGIKAS
360 370 380 390 400
SYNNWAQSQA DYALGSIGHS YVCGFGNNPP THPHHGSSSC PVAPQPCGWN
410 420 430 440 450
EYNSADPNPQ TLFGALVGGP DAQDNYVDDR DDYIHNEVAC DYNALFTGLL

AAMVELH
Length:457
Mass (Da):48,838
Last modified:May 18, 2010 - v1
Checksum:iF12D1B18C1CB4555
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FJ940759 mRNA. Translation: ADB85440.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FJ940759 mRNA. Translation: ADB85440.1.

3D structure databases

ProteinModelPortaliD4HRL2.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.50.10.10. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
IPR018221. Glyco_hydro_9_AS.
[Graphical view]
PfamiPF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 1 hit.
PROSITEiPS00698. GLYCOSYL_HYDROL_F9_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Molecular insight into lignocellulose digestion by a marine isopod in the absence of gut microbes."
    King A.J., Cragg S.M., Li Y., Dymond J., Guille M.J., Bowles D.J., Bruce N.C., Graham I.A., McQueen-Mason S.J.
    Proc. Natl. Acad. Sci. U.S.A. 107:5345-5350(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiD4HRL2_9CRUS
AccessioniPrimary (citable) accession number: D4HRL2
Entry historyi
Integrated into UniProtKB/TrEMBL: May 18, 2010
Last sequence update: May 18, 2010
Last modified: February 4, 2015
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.