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D4H827

- D4H827_DENA2

UniProt

D4H827 - D4H827_DENA2

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Protein

Alanine racemase

Gene
Dacet_1406
Organism
Denitrovibrio acetiphilus (strain DSM 12809 / N2460)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotation

Cofactori

Pyridoxal phosphate By similarity.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei40 – 401Proton acceptor; specific for D-alanine By similarityUniRule annotation
Binding sitei140 – 1401Substrate By similarityUniRule annotation
Active sitei258 – 2581Proton acceptor; specific for L-alanine By similarityUniRule annotation
Binding sitei306 – 3061Substrate; via amide nitrogen By similarityUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciDACE522772:GHC2-1419-MONOMER.
UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Dacet_1406Imported
OrganismiDenitrovibrio acetiphilus (strain DSM 12809 / N2460)Imported
Taxonomic identifieri522772 [NCBI]
Taxonomic lineageiBacteriaDeferribacteresDeferribacteralesDeferribacteraceaeDenitrovibrio
ProteomesiUP000002012: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei40 – 401N6-(pyridoxal phosphate)lysine By similarityUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliD4H827.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000031444.
KOiK01775.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.

Sequencei

Sequence statusi: Complete.

D4H827-1 [UniParc]FASTAAdd to Basket

« Hide

MNSKLKALRP TYAEIDLRAF GKNIETAREL SGTDIIAIVK ADAYSHGELE    50
MCGYAYQKHN CTKFAVATIL EAIILREHLG EGVSIFVLGY IDETFYEEAY 100
EHNIIFTIND NDTATKYNEF LQRKNLHANV TVKINTGMNR LGFRTDMSWY 150
EFSSAYPALR PIHIMSHLSS ADTDREYTYN QIEEFHNFIA KNKIRCHTSL 200
LNSSGIAGYE NKFSLTRPGI MLYGYLDGGY DVKLEKVMRI YSRIVQIQYL 250
RKGDAVSYSR KFHADRNMAI GVVPIGYADG YPRCLSNKSH VFVDGIKCPV 300
IGNVCMDMMM VDLTGVNLNG SLKVEVLGDS IDADELAEMA GTISYEILTG 350
IQNRIPRIYI D 361
Length:361
Mass (Da):40,829
Last modified:May 18, 2010 - v1
Checksum:i696AFEC12DECAF09
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001968 Genomic DNA. Translation: ADD68176.1.
RefSeqiYP_003504132.1. NC_013943.1.

Genome annotation databases

EnsemblBacteriaiADD68176; ADD68176; Dacet_1406.
GeneIDi8875754.
KEGGidap:Dacet_1406.
PATRICi35352750. VBIDenAce54242_1392.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001968 Genomic DNA. Translation: ADD68176.1 .
RefSeqi YP_003504132.1. NC_013943.1.

3D structure databases

ProteinModelPortali D4H827.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADD68176 ; ADD68176 ; Dacet_1406 .
GeneIDi 8875754.
KEGGi dap:Dacet_1406.
PATRICi 35352750. VBIDenAce54242_1392.

Phylogenomic databases

HOGENOMi HOG000031444.
KOi K01775.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .
BioCyci DACE522772:GHC2-1419-MONOMER.

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR00492. alr. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 12809 / N2460.

Entry informationi

Entry nameiD4H827_DENA2
AccessioniPrimary (citable) accession number: D4H827
Entry historyi
Integrated into UniProtKB/TrEMBL: May 18, 2010
Last sequence update: May 18, 2010
Last modified: July 9, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi