D4GXI1 (D4GXI1_HALVD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-aminobutyrate aminotransferase EMBL ADE03288.1
EC=2.6.1.19 EMBL ADE03288.1

Gene names

Name:	gabT3 EMBL ADE03288.1
Ordered Locus Names:	HVO_2871 EMBL ADE03288.1
ORF Names:	C498_17538 EMBL ELY25006.1

Organism

Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) [Complete proteome] [HAMAP] EMBL ADE03288.1

Taxonomic identifier

309800 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Halobacteria › Halobacteriales › Halobacteriaceae › Haloferax › Haloferax volcanii

Protein attributes

Sequence length	450 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL ADE03288.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D4GXI1 [UniParc]. Last modified May 18, 2010. Version 1. Checksum: E322F8224D84E570	FASTA	450	49,116
	10 20 30 40 50 60 MDRETAVPRV DSMPGEKARE WVAYHHEHAA PSTYVYDFVW DITAESEGPF CTDIDGNVLL 70 80 90 100 110 120 DFTSHVAAAP LGYNNPKLTD RMAEFDLVDP TKIAGQDFYV SDGSAPGEER LPGPAALMDR 130 140 150 160 170 180 LTDLTSHYGM DTVFLSNSGA EAVENAIKIA YDHADGAKYG VTFEGAFHGR TLGALSLNRS 190 200 210 220 230 240 KSVYRRKFPE ISGVLDVPFC DDRTCSPETC SCGFFPDADS AVSKLRQKLH PKKGHIDADE 250 260 270 280 290 300 VAYVIVEPIQ GEGGYRFPSD AFVEELAAVV DDYDLTLIAD EIQTGVGRTG ELWGSDHYPL 310 320 330 340 350 360 EPDIITGAKG LRVGATISND GIFPDETSRL SSTWGAGDIV SSMQGVFTLE AIEEYDLLDN 370 380 390 400 410 420 AVARGRQFIE RMRDDAPDTV VDVRGKGLLL AVEFDTKERR DAVQEAALKR GLLTLSCGYK 430 440 450 VLRILPPLDV TAREIDLGAT MLLDAIEDVS

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The complete genome sequence of Haloferax volcanii DS2, a model archaeon." Hartman A.L., Norais C., Badger J.H., Delmas S., Haldenby S., Madupu R., Robinson J., Khouri H., Ren Q., Lowe T.M., Maupin-Furlow J., Pohlschroder M., Daniels C., Pfeiffer F., Allers T., Eisen J.A. PLoS ONE 5:E9605-E9605(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2.
[2]	"The Complete Genome Sequence of Haloferax volcanii DS2, a Model Archaeon." Hartman A.L., Norais C., Badger J.H., Delmas S., Haldenby S., Madupu R., Robinson J., Khouri H., Ren Q., Lowe T.M., Maupin-Furlow J., Pohlschroder M., Daniels C., Pfeiffer F., Allers T., Eisen J.A. PLoS ONE 5:E9605-E9605(2010) Cited for: NUCLEOTIDE SEQUENCE. Strain: DS2 EMBL ADE03288.1.
[3]	Becker E.A., Seitzer P., Tritt A., Larsen D., Yao A., Wu D., Darling A., Eisen J.A., Facciotti M.T. Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: DS2 EMBL ELY25006.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001956 Genomic DNA. Translation: ADE03288.1. AOHU01000103 Genomic DNA. Translation: ELY25006.1.
RefSeq	YP_003536881.1. NC_013967.1.
3D structure databases
ProteinModelPortal	D4GXI1.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADE03288; ADE03288; HVO_2871.
GeneID	8926726.
KEGG	hvo:HVO_2871.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000020206.
KO	K00823.
OMA	YQNFPKT.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 2 hits.
InterPro	IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D4GXI1_HALVD

Accession

Primary (citable) accession number: D4GXI1

Entry history

Integrated into UniProtKB/TrEMBL:	May 18, 2010
Last sequence update:	May 18, 2010
Last modified:	May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)