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D4GXI1 (D4GXI1_HALVD) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length450 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
D4GXI1 [UniParc].

Last modified May 18, 2010. Version 1.
Checksum: E322F8224D84E570

FASTA45049,116
        10         20         30         40         50         60 
MDRETAVPRV DSMPGEKARE WVAYHHEHAA PSTYVYDFVW DITAESEGPF CTDIDGNVLL 

        70         80         90        100        110        120 
DFTSHVAAAP LGYNNPKLTD RMAEFDLVDP TKIAGQDFYV SDGSAPGEER LPGPAALMDR 

       130        140        150        160        170        180 
LTDLTSHYGM DTVFLSNSGA EAVENAIKIA YDHADGAKYG VTFEGAFHGR TLGALSLNRS 

       190        200        210        220        230        240 
KSVYRRKFPE ISGVLDVPFC DDRTCSPETC SCGFFPDADS AVSKLRQKLH PKKGHIDADE 

       250        260        270        280        290        300 
VAYVIVEPIQ GEGGYRFPSD AFVEELAAVV DDYDLTLIAD EIQTGVGRTG ELWGSDHYPL 

       310        320        330        340        350        360 
EPDIITGAKG LRVGATISND GIFPDETSRL SSTWGAGDIV SSMQGVFTLE AIEEYDLLDN 

       370        380        390        400        410        420 
AVARGRQFIE RMRDDAPDTV VDVRGKGLLL AVEFDTKERR DAVQEAALKR GLLTLSCGYK 

       430        440        450 
VLRILPPLDV TAREIDLGAT MLLDAIEDVS 

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References

« Hide 'large scale' references
[1]"The complete genome sequence of Haloferax volcanii DS2, a model archaeon."
Hartman A.L., Norais C., Badger J.H., Delmas S., Haldenby S., Madupu R., Robinson J., Khouri H., Ren Q., Lowe T.M., Maupin-Furlow J., Pohlschroder M., Daniels C., Pfeiffer F., Allers T., Eisen J.A.
PLoS ONE 5:E9605-E9605(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2.
[2]"The Complete Genome Sequence of Haloferax volcanii DS2, a Model Archaeon."
Hartman A.L., Norais C., Badger J.H., Delmas S., Haldenby S., Madupu R., Robinson J., Khouri H., Ren Q., Lowe T.M., Maupin-Furlow J., Pohlschroder M., Daniels C., Pfeiffer F., Allers T., Eisen J.A.
PLoS ONE 5:E9605-E9605(2010)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DS2 EMBL ADE03288.1.
[3]Becker E.A., Seitzer P., Tritt A., Larsen D., Yao A., Wu D., Darling A., Eisen J.A., Facciotti M.T.
Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DS2 EMBL ELY25006.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001956 Genomic DNA. Translation: ADE03288.1.
AOHU01000103 Genomic DNA. Translation: ELY25006.1.
RefSeqYP_003536881.1. NC_013967.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADE03288; ADE03288; HVO_2871.
ELY25006; ELY25006; C498_17538.
GeneID8926726.
KEGGhvo:HVO_2871.

Phylogenomic databases

HOGENOMHOG000020206.
KOK00823.
OMATKIAGQD.

Enzyme and pathway databases

BioCycHVOL309800:GCOK-2877-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
InterProIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD4GXI1_HALVD
AccessionPrimary (citable) accession number: D4GXI1
Entry history
Integrated into UniProtKB/TrEMBL: May 18, 2010
Last sequence update: May 18, 2010
Last modified: April 16, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)