Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

GabT

Gene

gabT

Organism
Pantoea ananatis (strain LMG 20103)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciPANA706191:GJNK-2471-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
GabTImported
Gene namesi
Name:gabTImported
Ordered Locus Names:PANA_2404Imported
OrganismiPantoea ananatis (strain LMG 20103)Imported
Taxonomic identifieri706191 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePantoea
ProteomesiUP000001702 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD4GHQ4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000020206.
KOiK07250.
OMAiNEYRGVT.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D4GHQ4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQNVLAEQQT YADNSQLLDV RDHNVPRGII TAHPLVIERA KGSEVWDVEG
60 70 80 90 100
NRYLDFVGGI GVLNVGHNHP AVVNAVTRQL GMVSHACFQV AAYPGYIELA
110 120 130 140 150
QRLNKLVGGD EHYKSVFFTS GAEAVENAVK IARSYTQRPG IIAFDGAFHG
160 170 180 190 200
RTLLGVTLTG MSAPYKQNFG PFPGDVYRLP FPNPLHGVTE ADCLKALDQL
210 220 230 240 250
FSVQILPERV AAIIIEPVQG DGGFLPAGPA FMQALRRITT QHGIMLICDE
260 270 280 290 300
IQSGFGRTGT MFAFQQLGIK PDMITTAKSL AGGLPISGVV GKAEIMDSPA
310 320 330 340 350
PGGLGGTYGG NALACAAALA VLDIFEQENL LARSCQLGEQ LNQRLRQLAD
360 370 380 390 400
KYACIGDVRG VGFMQAVEIL DVDTHKPDSA LTQKILDSAC QEGLLLIKCG
410 420 430
LHRNTIRFLA PLVTTDSQLE EALHIFDIAL ARATGRLG
Length:438
Mass (Da):47,039
Last modified:May 18, 2010 - v1
Checksum:i444AFA670665BA98
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001875 Genomic DNA. Translation: ADD77571.1.
RefSeqiWP_013026283.1. NC_013956.2.
YP_003520699.1. NC_013956.2.

Genome annotation databases

EnsemblBacteriaiADD77571; ADD77571; PANA_2404.
GeneIDi11796166.
KEGGipam:PANA_2404.
PATRICi35385805. VBIPanAna151616_2494.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001875 Genomic DNA. Translation: ADD77571.1.
RefSeqiWP_013026283.1. NC_013956.2.
YP_003520699.1. NC_013956.2.

3D structure databases

ProteinModelPortaliD4GHQ4.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADD77571; ADD77571; PANA_2404.
GeneIDi11796166.
KEGGipam:PANA_2404.
PATRICi35385805. VBIPanAna151616_2494.

Phylogenomic databases

HOGENOMiHOG000020206.
KOiK07250.
OMAiNEYRGVT.

Enzyme and pathway databases

BioCyciPANA706191:GJNK-2471-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of Pantoea ananatis LMG20103, the causative agent of Eucalyptus blight and dieback."
    De Maayer P., Chan W.Y., Venter S.N., Toth I.K., Birch P.R., Joubert F., Coutinho T.A.
    J. Bacteriol. 192:2936-2937(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LMG 20103Imported.

Entry informationi

Entry nameiD4GHQ4_PANAM
AccessioniPrimary (citable) accession number: D4GHQ4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 18, 2010
Last sequence update: May 18, 2010
Last modified: May 27, 2015
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.