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D4GH05 (D4GH05_PANAM) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:amyA EMBL ADD77452.1
Ordered Locus Names:PANA_2285 EMBL ADD77452.1
OrganismPantoea ananatis (strain LMG 20103) [Complete proteome] [HAMAP] EMBL ADD77452.1
Taxonomic identifier706191 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePantoea

Protein attributes

Sequence length454 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D4GH05 [UniParc].

Last modified May 18, 2010. Version 1.
Checksum: B3DCCC5987B20207

FASTA45451,100
        10         20         30         40         50         60 
MAPPCYKGES GGYSVGYDSY DLFDLGEFEQ KGSKATKYGD KQQLLDAVNA LRSHDIGVLL 

        70         80         90        100        110        120 
DVVVNHKMGA DEKEQIRVNR VNPDNRDEIY PDVIECEAWT RFNFPARAGQ YSKFIWDYKC 

       130        140        150        160        170        180 
FSGVDHIENP DENGVFKIIN DYTAEGWNDQ VDSELGNFDY LMGANIDFRN NAVSEELKYW 

       190        200        210        220        230        240 
ARWVMEQVPC TGFRLDAVKH IPAWFYKAWI DHVQEVANEP LFIVAEYWSF ETDKLQEYIH 

       250        260        270        280        290        300 
QVDGKTMLFD APLHMNFHQA SKAGSAYDLS KIFDNSLVLA DPWHAVTIVA NHDTQPLQSL 

       310        320        330        340        350        360 
EAPVEAWFKP LAYALILLRE QGVPTVFYPD LFGASYQDEG GDGDVHQVDM PVIPELEGLI 

       370        380        390        400        410        420 
RARQLFGWGA QTDYFDHPNC VAFSRSGTAE KPGCVVIMSN GEAGEKHIAM GEGYAGKVWR 

       430        440        450 
DYLGHKSETI TTDDNGSALF SCNGGSVSVW VVEA 

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References

[1]"Genome sequence of Pantoea ananatis LMG20103, the causative agent of Eucalyptus blight and dieback."
De Maayer P., Chan W.Y., Venter S.N., Toth I.K., Birch P.R., Joubert F., Coutinho T.A.
J. Bacteriol. 192:2936-2937(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LMG 20103 EMBL ADD77452.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001875 Genomic DNA. Translation: ADD77452.1.
RefSeqYP_003520580.1. NC_013956.2.

3D structure databases

ProteinModelPortalD4GH05.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADD77452; ADD77452; PANA_2285.
GeneID8896157.
KEGGpam:PANA_2285.
PATRIC35385563. VBIPanAna151616_2373.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000094847.
KOK01176.
OMAWITKELA.

Enzyme and pathway databases

BioCycPANA706191:GJNK-2352-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD4GH05_PANAM
AccessionPrimary (citable) accession number: D4GH05
Entry history
Integrated into UniProtKB/TrEMBL: May 18, 2010
Last sequence update: May 18, 2010
Last modified: May 14, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)