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Protein
Submitted name:

AmyA

Gene

amyA

Organism
Pantoea ananatis (strain LMG 20103)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi65Calcium 1UniRule annotation1
Metal bindingi159Calcium 1UniRule annotation1
Metal bindingi167Calcium 2UniRule annotation1
Active sitei196NucleophileUniRule annotation1
Metal bindingi200Calcium 1; via carbonyl oxygenUniRule annotation1
Active sitei226Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandCalciumUniRule annotation, Metal-bindingUniRule annotation

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
AmyAImported
Gene namesi
Name:amyAImported
Ordered Locus Names:PANA_2285Imported
OrganismiPantoea ananatis (strain LMG 20103)Imported
Taxonomic identifieri706191 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesErwiniaceaePantoea
Proteomesi
  • UP000001702 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi706191.PANA_2285.

Structurei

3D structure databases

ProteinModelPortaliD4GH05.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 363AamyInterPro annotationAdd BLAST363

Phylogenomic databases

eggNOGiENOG410837T. Bacteria.
COG0366. LUCA.
HOGENOMiHOG000094847.
KOiK01176.
OMAiVLNHKMG.
OrthoDBiPOG091H0HQ3.

Family and domain databases

InterProiView protein in InterPro
IPR013776. A-amylase_thermo.
IPR006047. Glyco_hydro_13_cat_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

D4GH05-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPPCYKGES GGYSVGYDSY DLFDLGEFEQ KGSKATKYGD KQQLLDAVNA
60 70 80 90 100
LRSHDIGVLL DVVVNHKMGA DEKEQIRVNR VNPDNRDEIY PDVIECEAWT
110 120 130 140 150
RFNFPARAGQ YSKFIWDYKC FSGVDHIENP DENGVFKIIN DYTAEGWNDQ
160 170 180 190 200
VDSELGNFDY LMGANIDFRN NAVSEELKYW ARWVMEQVPC TGFRLDAVKH
210 220 230 240 250
IPAWFYKAWI DHVQEVANEP LFIVAEYWSF ETDKLQEYIH QVDGKTMLFD
260 270 280 290 300
APLHMNFHQA SKAGSAYDLS KIFDNSLVLA DPWHAVTIVA NHDTQPLQSL
310 320 330 340 350
EAPVEAWFKP LAYALILLRE QGVPTVFYPD LFGASYQDEG GDGDVHQVDM
360 370 380 390 400
PVIPELEGLI RARQLFGWGA QTDYFDHPNC VAFSRSGTAE KPGCVVIMSN
410 420 430 440 450
GEAGEKHIAM GEGYAGKVWR DYLGHKSETI TTDDNGSALF SCNGGSVSVW

VVEA
Length:454
Mass (Da):51,100
Last modified:May 18, 2010 - v1
Checksum:iB3DCCC5987B20207
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001875 Genomic DNA. Translation: ADD77452.1.

Genome annotation databases

EnsemblBacteriaiADD77452; ADD77452; PANA_2285.
KEGGipam:PANA_2285.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001875 Genomic DNA. Translation: ADD77452.1.

3D structure databases

ProteinModelPortaliD4GH05.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi706191.PANA_2285.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADD77452; ADD77452; PANA_2285.
KEGGipam:PANA_2285.

Phylogenomic databases

eggNOGiENOG410837T. Bacteria.
COG0366. LUCA.
HOGENOMiHOG000094847.
KOiK01176.
OMAiVLNHKMG.
OrthoDBiPOG091H0HQ3.

Family and domain databases

InterProiView protein in InterPro
IPR013776. A-amylase_thermo.
IPR006047. Glyco_hydro_13_cat_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiD4GH05_PANAM
AccessioniPrimary (citable) accession number: D4GH05
Entry historyiIntegrated into UniProtKB/TrEMBL: May 18, 2010
Last sequence update: May 18, 2010
Last modified: June 7, 2017
This is version 44 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.