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Protein
Submitted name:

AmyA

Gene

amyA

Organism
Pantoea ananatis (strain LMG 20103)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei196 – 1961NucleophileUniRule annotation
Active sitei226 – 2261Proton donorUniRule annotation

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
  2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciPANA706191:GJNK-2352-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
AmyAImported
Gene namesi
Name:amyAImported
Ordered Locus Names:PANA_2285Imported
OrganismiPantoea ananatis (strain LMG 20103)Imported
Taxonomic identifieri706191 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePantoea
ProteomesiUP000001702 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD4GH05.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000094847.
KOiK01176.
OMAiNDGNHWN.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

D4GH05-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPPCYKGES GGYSVGYDSY DLFDLGEFEQ KGSKATKYGD KQQLLDAVNA
60 70 80 90 100
LRSHDIGVLL DVVVNHKMGA DEKEQIRVNR VNPDNRDEIY PDVIECEAWT
110 120 130 140 150
RFNFPARAGQ YSKFIWDYKC FSGVDHIENP DENGVFKIIN DYTAEGWNDQ
160 170 180 190 200
VDSELGNFDY LMGANIDFRN NAVSEELKYW ARWVMEQVPC TGFRLDAVKH
210 220 230 240 250
IPAWFYKAWI DHVQEVANEP LFIVAEYWSF ETDKLQEYIH QVDGKTMLFD
260 270 280 290 300
APLHMNFHQA SKAGSAYDLS KIFDNSLVLA DPWHAVTIVA NHDTQPLQSL
310 320 330 340 350
EAPVEAWFKP LAYALILLRE QGVPTVFYPD LFGASYQDEG GDGDVHQVDM
360 370 380 390 400
PVIPELEGLI RARQLFGWGA QTDYFDHPNC VAFSRSGTAE KPGCVVIMSN
410 420 430 440 450
GEAGEKHIAM GEGYAGKVWR DYLGHKSETI TTDDNGSALF SCNGGSVSVW

VVEA
Length:454
Mass (Da):51,100
Last modified:May 18, 2010 - v1
Checksum:iB3DCCC5987B20207
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001875 Genomic DNA. Translation: ADD77452.1.
RefSeqiYP_003520580.1. NC_013956.2.

Genome annotation databases

EnsemblBacteriaiADD77452; ADD77452; PANA_2285.
KEGGipam:PANA_2285.
PATRICi35385563. VBIPanAna151616_2373.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001875 Genomic DNA. Translation: ADD77452.1.
RefSeqiYP_003520580.1. NC_013956.2.

3D structure databases

ProteinModelPortaliD4GH05.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADD77452; ADD77452; PANA_2285.
KEGGipam:PANA_2285.
PATRICi35385563. VBIPanAna151616_2373.

Phylogenomic databases

HOGENOMiHOG000094847.
KOiK01176.
OMAiNDGNHWN.

Enzyme and pathway databases

BioCyciPANA706191:GJNK-2352-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of Pantoea ananatis LMG20103, the causative agent of Eucalyptus blight and dieback."
    De Maayer P., Chan W.Y., Venter S.N., Toth I.K., Birch P.R., Joubert F., Coutinho T.A.
    J. Bacteriol. 192:2936-2937(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LMG 20103Imported.

Entry informationi

Entry nameiD4GH05_PANAM
AccessioniPrimary (citable) accession number: D4GH05
Entry historyi
Integrated into UniProtKB/TrEMBL: May 18, 2010
Last sequence update: May 18, 2010
Last modified: April 1, 2015
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.