Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

D4GG06 (D4GG06_PANAM) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length224 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. HAMAP-Rule MF_00124 RuleBase RU000544 SAAS SAAS020634

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124 SAAS SAAS020633

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124 SAAS SAAS020633.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding25 – 328ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding103 – 1064ATP By similarity HAMAP-Rule MF_00124

Sites

Active site1041Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1611Zinc By similarity HAMAP-Rule MF_00124
Metal binding1631Zinc By similarity HAMAP-Rule MF_00124
Metal binding1981Zinc By similarity HAMAP-Rule MF_00124
Metal binding2011Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
D4GG06 [UniParc].

Last modified May 18, 2010. Version 1.
Checksum: CEB6AE552DC0198C

FASTA22425,005
        10         20         30         40         50         60 
MVKSALFFHR IRESAQMAQL YFYYSAMNAG KSTALLQSSY NYQERGMRTL VYTAEIDNRF 

        70         80         90        100        110        120 
GAGKVSSRIG LSSPAVLYNA ASQLDVEIAQ EHARQPVHCV LVDESQFLTR EQVKALSDVV 

       130        140        150        160        170        180 
DNLDIPVLCY GLRTDFLGEL FTGSQYLLAW ADKLVELKTV CHCGRKAGMV LRLDSDGKPF 

       190        200        210        220 
REGEQVVIGG NERYISVCRK HYKKAIEQGC LQAIHGAQTP VGNK 

« Hide

References

[1]"Genome sequence of Pantoea ananatis LMG20103, the causative agent of Eucalyptus blight and dieback."
De Maayer P., Chan W.Y., Venter S.N., Toth I.K., Birch P.R., Joubert F., Coutinho T.A.
J. Bacteriol. 192:2936-2937(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LMG 20103 EMBL ADD77257.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001875 Genomic DNA. Translation: ADD77257.1.
RefSeqYP_003520385.1. NC_013956.2.

3D structure databases

ProteinModelPortalD4GG06.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADD77257; ADD77257; PANA_2090.
GeneID8895957.
KEGGpam:PANA_2090.
PATRIC35385145. VBIPanAna151616_2167.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000076391.
KOK00857.
OMARTICHCG.

Enzyme and pathway databases

BioCycPANA706191:GJNK-2148-MONOMER.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD4GG06_PANAM
AccessionPrimary (citable) accession number: D4GG06
Entry history
Integrated into UniProtKB/TrEMBL: May 18, 2010
Last sequence update: May 18, 2010
Last modified: April 16, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)