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D4G8K0

- D4G8K0_RIEPU

UniProt

D4G8K0 - D4G8K0_RIEPU

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Protein

Elongation factor Tu

Gene

tuf

Organism
Riesia pediculicola (strain USDA)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi19 – 268GTPUniRule annotation
Nucleotide bindingi81 – 855GTPUniRule annotation
Nucleotide bindingi136 – 1394GTPUniRule annotation

GO - Molecular functioni

  1. GTPase activity Source: InterPro
  2. GTP binding Source: UniProtKB-HAMAP
  3. translation elongation factor activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotation

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciRPED515618:GH7A-404-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Short name:
EF-TuUniRule annotation
Gene namesi
Name:tufUniRule annotationImported
Ordered Locus Names:RIEPE_0412Imported
OrganismiRiesia pediculicola (strain USDA)Imported
Taxonomic identifieri515618 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeCandidatus Riesia
ProteomesiUP000001700: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Monomer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000229290.
KOiK02358.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D4G8K0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSKEKFNRSK LHINVGTIGH VDHGKTTLTS AITTVLSKKY GGTAFAFDQI
60 70 80 90 100
DNAPEEKERG ITISASHVEY DTPKRHYAHV DCPGHADYVK NMITGAAQMD
110 120 130 140 150
GAILVVAATD GAMPQTREHI LLSRQVGVPY IVVFLNKCDM VEDQELLELV
160 170 180 190 200
EMEVRELLNQ YNFPGDSTPI IRGSALKSLE GEKKWEEKIL ELTNTLDSYI
210 220 230 240 250
PDPKRAINLP FLLPIEDVFS ISGRGTVVTG RIEQGVLKVG EEVEVIGIRD
260 270 280 290 300
TKKTICTGIE MFRKLLNEGM AGENVGVLLR GIRREEVERG QVLAKPGSIN
310 320 330 340 350
PHIKFESEVY VLKKEEGGRH TPFFNGYRPQ FYFRTTDVTG VVELPSDIEM
360 370 380 390
VLPGDNIQIV VTLIEHIAMN EGLRFAIREG GKTVGAGVVS KILT
Length:394
Mass (Da):43,656
Last modified:May 18, 2010 - v1
Checksum:iA55CA707C02FF3CC
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001085 Genomic DNA. Translation: ADD79738.1.
RefSeqiYP_003603270.1. NC_014109.1.

Genome annotation databases

EnsemblBacteriaiADD79738; ADD79738; RIEPE_0412.
GeneIDi9112109.
KEGGirip:RIEPE_0412.
PATRICi37224257. VBICanRie18279_0392.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001085 Genomic DNA. Translation: ADD79738.1 .
RefSeqi YP_003603270.1. NC_014109.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADD79738 ; ADD79738 ; RIEPE_0412 .
GeneIDi 9112109.
KEGGi rip:RIEPE_0412.
PATRICi 37224257. VBICanRie18279_0392.

Phylogenomic databases

HOGENOMi HOG000229290.
KOi K02358.

Enzyme and pathway databases

BioCyci RPED515618:GH7A-404-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. EFACTOR_GTP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of Riesia pediculicola USDA."
    Kirkness E.F.
    Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: USDAImported.

Entry informationi

Entry nameiD4G8K0_RIEPU
AccessioniPrimary (citable) accession number: D4G8K0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 18, 2010
Last sequence update: May 18, 2010
Last modified: October 29, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3